ggKbase home page

qs_5_scaffold_542_3

Organism: QS_5_Halosimplex_carlsbadense_68_33

near complete RP 35 / 55 MC: 3 BSCG 29 / 51 MC: 1 ASCG 34 / 38
Location: 1701..2669

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSR0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 312.0
  • Bit_score: 589
  • Evalue 1.60e-165
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 312.0
  • Bit_score: 589
  • Evalue 2.20e-165
tfbA; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 322.0
  • Bit_score: 565
  • Evalue 1.20e-158

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 969
ATGGAACGGCCGAGCCGCCAGCGTGAGCGCGCGGAGTCCCGGGAGAAAGAGCAGGAATCTGAGGACGAACGGGCCGAACAGACCTGTCCCGAGTGCGATTCCGCCGCGCTCGTCACGAGTGCGGACGGGGGTGAGGTGGTCTGTGAGGACTGCGGACTGATCATCGACGAGGCCAACATCGACCGCGGGCCGGAGTGGCGGGCGTTCAATCACAGCGAGCGACAGGAGAAGTCGCGGGTGGGCGCGCCGACCACCCAGACGATGCACGACAAGGGGCTGACTACCCAGATCGACTGGAAGGACAAGGACGCCTACGGGCGCTCGCTCTCCTCGGAGAAGCGAAGCCAGATGCACCGGCTCCGAAAGTGGCAGGAGCGCATCCGCACGAAAGACGCCGGCGAGCGCAACCTCCAGTTCGCCCTCTCGGAGATAGACCGCATGGCCTCCGCGCTCGGGGTTCCACGCTCCGTCCGGGAGGTCGCCTCGGTCATCTACCGGCGCGCGCTCGACGAGGACCTCATCCGCGGGCGGTCCATCGAGGGCGTCGCCACCGCCTGCCTGTACGCCGCCTGCCGGCAGGAGGACATCCCCCGCTCGCTGGAGGAGGTCTCGGAGGTCTCCCGGGTCGAACAGAAGGAGATCGGCCGGACGTATCGATACGTCGCCCAGGAACTCAGCCTGAAGATGGAACCCGTGGATCCGAAGCAGTACGTCCCCCGCTTCGTCTCGGAACTCGGCCTCTCGGAGGAGGTCCAGGCCAAAGCCAACGAGATAATCGACGTCACCGCCGAGAAAGGTCTGCTCTCGGGCAAGTCCCCGACGGGCTATGCCGCCGCCGCCATCTACGCCGCTTCGCTTCTGTGCAACGAAAAGAAGACACAGCGCGAGGTCGCCGACGTCGCCCAGGTGACCGAGGTCACCATCCGGAACCGGTACCAGGAACAGATCGAAGCGATGGGCATCCACTGA
PROTEIN sequence
Length: 323
MERPSRQRERAESREKEQESEDERAEQTCPECDSAALVTSADGGEVVCEDCGLIIDEANIDRGPEWRAFNHSERQEKSRVGAPTTQTMHDKGLTTQIDWKDKDAYGRSLSSEKRSQMHRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALDEDLIRGRSIEGVATACLYAACRQEDIPRSLEEVSEVSRVEQKEIGRTYRYVAQELSLKMEPVDPKQYVPRFVSELGLSEEVQAKANEIIDVTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIEAMGIH*