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qs_5_scaffold_124_6

Organism: QS_5_Halobacteriales_65_19

near complete RP 33 / 55 MC: 8 BSCG 29 / 51 MC: 1 ASCG 37 / 38 MC: 1
Location: 4396..5262

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5B3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 284.0
  • Bit_score: 397
  • Evalue 1.30e-107
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 284.0
  • Bit_score: 397
  • Evalue 1.90e-107
transcription initiation factor iib (tfiib) similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 295.0
  • Bit_score: 385
  • Evalue 1.50e-104

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Taxonomy

Halococcus hamelinensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 867
ATGAGTCAGGCGGAGTCGACGATGGCCTGTCCGGAGTGCAGTGGACGCCTCGAAGCCGGCGAGGAGACCTTCTGTGGCGACTGTGGGTTGATCGTCGCCGAGGACTTCATAGACCGGGGCCCCGAGTGGCGATCGTTCAGCGACGATAGCGAAAACCGCGAGCGAACCGGCGCGCCGCTCACACGGGCGCGTCACGACCGCGGCCTCTCGACGGAGATCGGTCGTTCGCGCGACCTCAGCAGTCGAAAGCGCCGCCAGCTCGCCCGGATGCGCCGACAGCACAACCGCGCTCGCATCTCCTCGAAGGCCGACCGGAATCGGGTGTACGCTTTTACCGAGATCCGCCGGCTGGTGAGCAGCTTAGAACTCCCTCGAAGCATCCGCGATCAGGCCTGTGTGCTCTTCGAATCCGCCCAGTCCGAGGACTTACTGCGCGGGCGCTCGCTCGAAGGCTTCGCCGCCGCGTCGGTCTATGCGGTCTGTCGGACCGCCGCCGTCTCGCGAACCGTCGGCGAGATCGCCGGAGCCGCTCGTGCCTCGGAAGCCGAACTCAAAGCCGCCTACGACGCCTTGAACCGGGAACTCGGCCTCCCGACGGGCCCGATCGATCCCGCCGAGTACATCGGTCGCTTCGCGAGCCAGCTCGACGTGCCGAACGACGTCGAGGCGCGCTCGCGCGACCTCGTGACCGAGGGACGCGGTCGCGGACTGATCAACGGGCGCAATCCGAGCGGCTTCGCCGCGACCTGTTTGTACGCTGCGGCGATCGAAGCCGGCCACGATCTCACCCAGCGCGAGGCCGCCGACGTCGCTGGTGTCACGCCCGTTACCCTCCGGACCGCGTACTACGACCTGCTCGACGAGTAA
PROTEIN sequence
Length: 289
MSQAESTMACPECSGRLEAGEETFCGDCGLIVAEDFIDRGPEWRSFSDDSENRERTGAPLTRARHDRGLSTEIGRSRDLSSRKRRQLARMRRQHNRARISSKADRNRVYAFTEIRRLVSSLELPRSIRDQACVLFESAQSEDLLRGRSLEGFAAASVYAVCRTAAVSRTVGEIAGAARASEAELKAAYDALNRELGLPTGPIDPAEYIGRFASQLDVPNDVEARSRDLVTEGRGRGLINGRNPSGFAATCLYAAAIEAGHDLTQREAADVAGVTPVTLRTAYYDLLDE*