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QS_6_UNK

In projects: QS_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 23.64 Longest contig: 227.17 Kbp Bin length: 58.25 Mbp GC content: 61.52 %
Contigs count: 19416 Features count: 74915 rRNAs count: 9 tRNAs count: 635

Genome completeness

megabin RP 52 / 55 MC: 48 BSCG 49 / 51 MC: 46 ASCG 38 / 38 MC: 38
Displaying items 201-250 of 19416 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_6_scaffold_3870
Species: Natronomonas pharaonis (75%)
4 4014 bp 76.03 82.71 100.90
qs_6_scaffold_17058
Species: Natronomonas pharaonis (50%)
2 1115 bp 73.81 31.39 100.90
qs_6_scaffold_4601
Species: Rhodothermus marinus (100%)
2 2590 bp 65.68 40.66 100.89
qs_6_scaffold_8065
Species: halophilic archaeon J07HX5 (100%)
2 1811 bp 69.46 8.39 100.88
qs_6_scaffold_12717 3 1362 bp 63.80 9.10 100.88
qs_6_scaffold_19250
Species: Haloarcula marismortui (50%)
2 1026 bp 63.74 9.06 100.88
qs_6_scaffold_16511
Species: Hydrogenovibrio marinus (50%)
2 1142 bp 46.85 4.29 100.88
qs_6_scaffold_5515
Species: Desulfovibrio sp. X2 (50%)
2 2302 bp 47.78 10.90 100.87
qs_6_scaffold_18792 2 1044 bp 48.28 10.92 100.86
qs_6_scaffold_12055
Species: Natronomonas moolapensis (100%)
3 1410 bp 74.54 46.17 100.85
qs_6_scaffold_15464
Order: Natrialbales (66.67%)
3 1196 bp 64.72 34.62 100.84
qs_6_scaffold_11688
Species: Haloarcula japonica (50%)
2 1437 bp 70.35 11.55 100.84
qs_6_scaffold_13322
Genus: Halococcus (66.67%)
3 1321 bp 66.54 14.61 100.83
qs_6_scaffold_6597
Order: Chroococcales (66.67%)
3 2047 bp 63.31 6.06 100.83
qs_6_scaffold_8918 4 1699 bp 62.15 7.89 100.82
qs_6_scaffold_15169
Species: Natronomonas pharaonis (50%)
4 1705 bp 71.55 89.21 100.82
qs_6_scaffold_10160
Species: Natronomonas pharaonis (66.67%)
3 2375 bp 72.59 102.91 100.80
qs_6_scaffold_24211
Species: Natrialba aegyptia (50%)
2 1503 bp 58.22 5.26 100.80
qs_6_scaffold_11193
Class: Halobacteria (100%)
5 2646 bp 59.67 49.77 100.79
qs_6_scaffold_12240 5 1396 bp 64.11 5.09 100.79
qs_6_scaffold_19392
Species: Halorubrum arcis (50%)
2 1021 bp 64.05 14.99 100.78
qs_6_scaffold_16301
Species: Haladaptatus paucihalophilus (50%)
2 1152 bp 66.84 10.50 100.78
qs_6_scaffold_19243
Species: marine sediment metagenome (100%)
2 1027 bp 49.37 7.01 100.78
qs_6_scaffold_15502
Species: Natronomonas pharaonis (66.67%)
3 1194 bp 68.76 15.58 100.75
qs_6_scaffold_15219
Species: Halorhabdus utahensis (66.67%)
3 1209 bp 69.56 9.76 100.74
qs_6_scaffold_7478
Species: Natronomonas moolapensis (100%)
3 1897 bp 75.33 43.81 100.74
qs_6_scaffold_5992
Species: Salinibacter ruber (66.67%)
3 2183 bp 63.99 54.37 100.73
qs_6_scaffold_14534
Species: Halosimplex carlsbadense (50%)
2 1248 bp 61.14 7.37 100.72
qs_6_scaffold_9301
Class: Halobacteria (66.67%)
6 2946 bp 71.49 10.93 100.71
qs_6_scaffold_6191
Domain: Bacteria (66.67%)
3 4085 bp 70.65 7.98 100.69
qs_6_scaffold_5247
Class: Halobacteria (75%)
4 2372 bp 53.88 11.68 100.68
qs_6_scaffold_9162
Genus: Halorubrum (66.67%)
3 2095 bp 73.37 43.68 100.67
qs_6_scaffold_12894 4 1350 bp 62.07 6.15 100.67
qs_6_scaffold_7139
Genus: Haloarcula (75%)
4 1952 bp 73.21 11.12 100.67
qs_6_scaffold_6999
Species: Natronomonas pharaonis (100%)
3 1976 bp 74.90 46.41 100.66
qs_6_scaffold_12588
Species: Natronomonas moolapensis (50%)
2 1836 bp 69.99 35.89 100.65
qs_6_scaffold_17773
Genus: Natronomonas (66.67%)
3 1085 bp 69.40 31.24 100.65
qs_6_scaffold_12173
Domain: Bacteria (66.67%)
3 1401 bp 61.67 18.34 100.64
qs_6_scaffold_12743
Order: Halobacteriales (50%)
4 2337 bp 74.11 18.53 100.64
qs_6_scaffold_11930
Species: Halobacterium salinarum (50%)
2 1419 bp 74.35 24.95 100.63
qs_6_scaffold_6504
Species: Natronomonas moolapensis (66.67%)
3 2063 bp 73.15 37.08 100.63
qs_6_scaffold_16516
Species: Candidatus Halobonum tyrrellensis (50%)
2 1142 bp 73.91 45.53 100.61
qs_6_scaffold_13412
Species: Natronomonas moolapensis (50%)
2 1315 bp 74.07 84.11 100.61
qs_6_scaffold_30131
Species: Salinibacter ruber (100%)
2 1318 bp 70.26 9.48 100.61
qs_6_scaffold_11039
Species: Halobacterium salinarum (50%)
2 1491 bp 73.31 66.26 100.60
qs_6_scaffold_15922
Species: Haloarcula sinaiiensis (50%)
2 1169 bp 67.41 6.50 100.60
qs_6_scaffold_19911
Species: Natronomonas pharaonis (50%)
2 1002 bp 63.27 23.95 100.60
qs_6_scaffold_15891
Order: Halobacteriales (100%)
3 1172 bp 73.12 10.58 100.60
qs_6_scaffold_19348
Species: Halococcus saccharolyticus (50%)
2 1694 bp 56.14 7.02 100.59
qs_6_scaffold_15414
Species: Natrinema gari (50%)
2 1199 bp 62.39 11.68 100.58
Displaying items 201-250 of 19416 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.