ggKbase home page

qs_6_scaffold_119

Search features with annotation key words

Displaying items 31-54 of 54 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_119_31
unknown

Not on your lists

comp(24708..25148)
DNA (441bp) protein (147aa)

This feature has no annotations

qs_6_scaffold_119_trna_1
unknown

Not on your lists

25376..25459
DNA (84bp)
transferRNA
qs_6_scaffold_119_32
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


25478..26014
DNA (537bp) protein (179aa)
30S ribosomal protein S13 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT0_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
30S ribosomal protein S13
qs_6_scaffold_119_33
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


26011..26526
DNA (516bp) protein (172aa)
30S ribosomal protein S4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT56_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rps4p; 30S ribosomal protein S4P
qs_6_scaffold_119_34
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


26528..26917
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH1_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rps11p; 30S ribosomal protein S11
qs_6_scaffold_119_35
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26920..27732
DNA (813bp) protein (271aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUM9_9EURY
RNA polymerase insert
qs_6_scaffold_119_trna_2
unknown

Not on your lists

27964..28048
DNA (85bp)
transferRNA
qs_6_scaffold_119_36
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


28064..28414
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQR0_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
50S ribosomal protein L18e
qs_6_scaffold_119_37
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


28411..28848
DNA (438bp) protein (146aa)
50S ribosomal protein L13 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT4_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
50S ribosomal protein L13
qs_6_scaffold_119_38
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


28842..29240
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2F7A9_9EURY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rps9p; 30S ribosomal protein S9
qs_6_scaffold_119_39
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


29247..29441
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase subunit n (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250, ECO:0000313|EMBL:ELZ34912.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250, ECO:0000313|EMBL:ELZ34912.1};; TaxID=1227487 species=
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZNA5_9ARCH
qs_6_scaffold_119_40
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29438..29617
DNA (180bp) protein (60aa)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUN2_9EURY
qs_6_scaffold_119_41
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29647..30813
DNA (1167bp) protein (389aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQR5_9EURY
qs_6_scaffold_119_42
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


30810..31568
DNA (759bp) protein (253aa)
30S ribosomal protein S2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT8_9EURY
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rps2P; 30S ribosomal protein S2
qs_6_scaffold_119_43
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31674..32066
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25588.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_6_scaffold_119_44
unknown

Not on your lists

32524..32814
DNA (291bp) protein (97aa)

This feature has no annotations

qs_6_scaffold_119_45
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32995..33978
DNA (984bp) protein (328aa)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=79
erg12; mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUN7_9EURY
qs_6_scaffold_119_46
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

33975..34772
DNA (798bp) protein (266aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=797114 species="Archaea; Euryarchaeota; Ha
Isopentenyl phosphate kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQS0_9EURY
isopentenyl phosphate kinase
qs_6_scaffold_119_47
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

34855..36132
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQU4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25591.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_6_scaffold_119_48
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

36295..36918
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GT02_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ74683.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
qs_6_scaffold_119_49
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

37356..38327
DNA (972bp) protein (324aa)
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; TaxID=797114 species="Archaea; Euryarchaeota; Halobac
Beta-lactamase domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT69_9EURY
hydrolase
qs_6_scaffold_119_50
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

38324..38710
DNA (387bp) protein (129aa)
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; TaxID=797114 species="Archaea; Euryarchaeota; Halobac
Beta-lactamase domain protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AJV4_NATGS
metallo-beta-lactamase superfamily hydrolase
qs_6_scaffold_119_51
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

38712..39752
DNA (1041bp) protein (347aa)
idsA; geranylgeranyl diphosphate synthase (EC:2.5.1.10)
Geranylgeranyl diphosphate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSI2_9EURY
Geranylgeranyl diphosphate synthase {ECO:0000313|EMBL:ELZ25593.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
qs_6_scaffold_119_52
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

39823..41559
DNA (1737bp) protein (579aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00016154}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00088701};; Glutamyl-tRNA synthetase {ECO:00
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUP2_9EURY
Displaying items 31-54 of 54 in total

View Taxonomy