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qs_6_scaffold_130

Search features with annotation key words

Displaying items 31-60 of 186 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_130_31
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30516..31274)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFE4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44068.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_6_scaffold_130_32
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31371..31640
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SP08_9EURY
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:ERH02584.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halo
AbrB family transcription regulator
qs_6_scaffold_130_33
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31637..32053
DNA (417bp) protein (139aa)
Ribonuclease VapC n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q7R3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG00878.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qs_6_scaffold_130_34

Not on your lists

comp(32154..33860)
DNA (1707bp) protein (569aa)
Signal transduction histidine kinase n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q3E8_9EURY
Signal transduction histidine kinase {ECO:0000313|EMBL:ESS08023.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
HTR-like protein
qs_6_scaffold_130_35
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


33978..35339
DNA (1362bp) protein (454aa)
Translation initiation factor 2 subunit gamma n=1 Tax=halophilic archaeon J07HX64 RepID=U1QWY0_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1085028 species="Arc
translation initiation factor 2 subunit gamma
qs_6_scaffold_130_36
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

35336..35716
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3C1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29192.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
nucleotide binding protein PINc
qs_6_scaffold_130_37
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


35734..36312
DNA (579bp) protein (193aa)
DNA-directed RNA polymerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZV1_HALMD
DNA-directed RNA polymerase subunit E'
DNA-directed RNA polymerase {ECO:0000313|EMBL:ACV46859.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohat
qs_6_scaffold_130_38
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

36312..36509
DNA (198bp) protein (66aa)
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D171_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
qs_6_scaffold_130_39
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

36512..37093
DNA (582bp) protein (194aa)
UPF0218 protein C443_12281 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLJ4_HALAR
UPF0218 protein C443_12281 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentine
hypothetical protein
qs_6_scaffold_130_40
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(37415..38461)
DNA (1047bp) protein (349aa)
RNA methylase; K07446 tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] id=24647374 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
N2-methylguanosine tRNA methyltransferase {ECO:0000313|EMBL:ERH08522.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
RNA methylase
qs_6_scaffold_130_41
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

38617..39177
DNA (561bp) protein (187aa)
TATA-box-binding protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PDU1_9EURY
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
TATA-box binding family protein
qs_6_scaffold_130_42
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

39182..40129
DNA (948bp) protein (316aa)
serA2; phosphoglycerate dehydrogenase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I6K1_9EURY
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ELZ91039.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis AT
qs_6_scaffold_130_trna_4
unknown

Not on your lists

comp(40254..40359)
DNA (106bp)
transferRNA
qs_6_scaffold_130_43
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

40533..40958
DNA (426bp) protein (142aa)
NifU-like protein n=4 Tax=Haloarcula RepID=Q5UY39_HALMA
nifU1; NifU-like protein
NifU-like protein {ECO:0000313|EMBL:EMA22491.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 1228
qs_6_scaffold_130_44
unknown

Not on your lists

comp(41180..41356)
DNA (177bp) protein (59aa)

This feature has no annotations

qs_6_scaffold_130_45
unknown

Not on your lists

comp(41440..41658)
DNA (219bp) protein (73aa)

This feature has no annotations

qs_6_scaffold_130_46
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

41834..42970
DNA (1137bp) protein (379aa)
Peptidase S8/S53 subtilisin kexin sedolisin n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W506_9EURY
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AGN01442.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarcha
qs_6_scaffold_130_47
unknown

Not on your lists

42951..43346
DNA (396bp) protein (132aa)

This feature has no annotations

qs_6_scaffold_130_48
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(43368..45458)
DNA (2091bp) protein (697aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IBK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04171.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qs_6_scaffold_130_49
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(45609..46523)
DNA (915bp) protein (305aa)
Malate dehydrogenase {ECO:0000313|EMBL:EMA68047.1}; EC=1.1.1.37 {ECO:0000313|EMBL:EMA68047.1};; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;
Malate dehydrogenase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PD52_9EURY
malate/lactate dehydrogenase
qs_6_scaffold_130_50
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

46612..47901
DNA (1290bp) protein (430aa)
ssnA; cytosine deaminase (EC:3.5.4.1)
N-ethylammeline chlorohydrolase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0ITN7_9EURY
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:CQR49750.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="H
qs_6_scaffold_130_51
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(47916..48233)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6Y5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53692.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_6_scaffold_130_52
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(48233..48565)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N747_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53691.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_6_scaffold_130_53
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(48695..48898)
DNA (204bp) protein (68aa)
Putative restriction/modification enzyme n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JMC0_NATP1
type I restriction-modification system methyltransferase subunit
Putative restriction/modification enzyme {ECO:0000313|EMBL:ELY73987.1}; Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:AGB32404.1}; TaxID=797303 species="Archaea; E
qs_6_scaffold_130_54
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

49067..49519
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000378792C
Uncharacterized protein {ECO:0000313|EMBL:EMA53734.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_6_scaffold_130_55
unknown

Not on your lists

comp(49507..49662)
DNA (156bp) protein (52aa)

This feature has no annotations

qs_6_scaffold_130_56
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(49698..50117)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003720182
Putative restriction/modification enzyme {ECO:0000313|EMBL:EMA44459.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nit
type I restriction-modification system methyltransferase subunit
qs_6_scaffold_130_57
unknown

Not on your lists

50275..50391
DNA (117bp) protein (39aa)

This feature has no annotations

qs_6_scaffold_130_58
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(50517..52091)
DNA (1575bp) protein (525aa)
MATE efflux family protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PJQ9_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA68975.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13
MATE efflux family protein
qs_6_scaffold_130_59
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(52194..52841)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000377DFB8
TetR family transcriptional regulator {ECO:0000313|EMBL:ELZ48665.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum corien
TetR family transcriptional regulator
Displaying items 31-60 of 186 in total

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