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qs_6_scaffold_213_21

Organism: QS_6_Halosimplex_carlsbadense_69_22

near complete RP 28 / 55 MC: 3 BSCG 22 / 51 MC: 2 ASCG 32 / 38 MC: 1
Location: 17958..19430

Top 3 Functional Annotations

Value Algorithm Source
Retinal pigment epithelial membrane protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V681_HALMA similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 479.0
  • Bit_score: 387
  • Evalue 2.40e-104
retinal pigment epithelial membrane protein similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 479.0
  • Bit_score: 387
  • Evalue 6.70e-105
Retinal pigment epithelial membrane protein {ECO:0000313|EMBL:AAV44971.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 479.0
  • Bit_score: 387
  • Evalue 3.30e-104

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Taxonomy

Haloarcula marismortui → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1473
ATGGCGACCGATGCGGACGGCGACTCGGCGGAGCGGGCGGACGGTGACTCCGCGGAGTGGGTGACGTCCATCGACGAGGAGCGACACACCGAACTCGACGTAGAGGGGGAGGTGCCGGCGTGGCTCGACGGCTCGCTGGTACGGAACGGGCCGGGGACGTTCGACATCGGGGACCAGCGGGTGGGCCACTACTTCGACGGCCTGGCGATGCTCCGGAAGTTCGGTTTCCGGGACGGGCGGGTGACCTACCGCAACCGGTTTCTGCGGACCGACGCCTACGAGGACGCGACGAATGGGGAGTACTCGGGCGGGTTCGGGACGGACGAGTCGCTGTCGGTCCTCGAACGCGTCGTCGCGTTTCTCAGGCCGGCCTCGCCGACGGACAACACCAACGTGAACGTGTGGCGGTTCGGCGGCGACCACGCCGCGCTCACGGAGACGAAGTACCTCACGCTGTTCGACCCCGAGACGCTGGAGACGACCGGTCTGACCACCTACCGGGGTGAACCCGAGGCCCAGCAGGTGTCGGGCCACCCACACCACGACCGCGACCGCGGCGAGACCGTCAGCATGTCCACCTACTACGGGCGACAGACCGAATACCGGGTCTGGCGCCAGGCCGACGACAGCTGGGAACGAGAGGCCGTCTGTCGCATTCCGGTCGACAAGCCCGCCTATCTCCACAGTTTCGCGCTGACCGACCGGTACGTCGTCCTCGTGGAGTTCCCGCTGGTGGTGTCGCCGCTGAAGCTCCTGATCCCGTCGAACGAGGCGTTCATCAAGCGCTTCGAGTGGGAACCCGACAGGGGGACCCGCTTCCGGGTCGTCGACCGGCAGTCCGGGGAGGTCGTCGCCGAACCGGTCACGGAGGCGTTCTTCTGTTTCCACCACGTGAACGCCTACGAGGAACCCGGCGACGGCCGGGGCGCGGAACTGGTCGTGGACATGGTGACGTTCCCGGACGCGCGGTCGATCGACGAACTGTACTTCGAGGACGGAACCGCACCGTCCGACGTCGCGACAGAGGGGGCCCAGCTCTCGCGGTGCCGGGTCTCGCTGGGCGGACGGACGGACGCCGCGGTCGAACGACGCCGGCTCCACGAGGGTCACCTCGGGATGCCCCGCGTCTCGCCCGACGTGTACGCCAGCGAGTACCGGTACGTCTACGCACACGGGGAACCGGGCGAGAAACTGGTCGGGTTCCCGGAATCGGTCCTCAAAATCGACGTCGAGACCGGCGAGGCAGTCTGGCGGGACCTCGGGGGGTACGTCTCCGAACCGGTGTTCGCCCCCCACCCCGACGAGGACGCCGAGGACGCGGGCGTGGTGCTGACGGTCGCACTCGGCCCGGACGGCGACCGGTCGATTCTCTACGTCTTCGACGCCGCGGACCTGGCGTTGCTCGCGGAGGCCCCGCTCCCACACCACCTCCCGATGGACTTCCACGGGCAGTTTTTCCCCGGCGTTCACTGA
PROTEIN sequence
Length: 491
MATDADGDSAERADGDSAEWVTSIDEERHTELDVEGEVPAWLDGSLVRNGPGTFDIGDQRVGHYFDGLAMLRKFGFRDGRVTYRNRFLRTDAYEDATNGEYSGGFGTDESLSVLERVVAFLRPASPTDNTNVNVWRFGGDHAALTETKYLTLFDPETLETTGLTTYRGEPEAQQVSGHPHHDRDRGETVSMSTYYGRQTEYRVWRQADDSWEREAVCRIPVDKPAYLHSFALTDRYVVLVEFPLVVSPLKLLIPSNEAFIKRFEWEPDRGTRFRVVDRQSGEVVAEPVTEAFFCFHHVNAYEEPGDGRGAELVVDMVTFPDARSIDELYFEDGTAPSDVATEGAQLSRCRVSLGGRTDAAVERRRLHEGHLGMPRVSPDVYASEYRYVYAHGEPGEKLVGFPESVLKIDVETGEAVWRDLGGYVSEPVFAPHPDEDAEDAGVVLTVALGPDGDRSILYVFDAADLALLAEAPLPHHLPMDFHGQFFPGVH*