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QS_7_UNK

In projects: QS_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.83 Longest contig: 259.33 Kbp Bin length: 60.91 Mbp GC content: 61.58 %
Contigs count: 20203 Features count: 77924 rRNAs count: 9 tRNAs count: 725

Genome completeness

megabin RP 50 / 55 MC: 45 BSCG 50 / 51 MC: 43 ASCG 38 / 38 MC: 38
Displaying items 19451-19500 of 20203 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_7_scaffold_33310
Species: Halorhabdus tiamatea (50%)
2 1307 bp 58.00 41.24 43.61
qs_7_scaffold_6673 4 4114 bp 55.08 8.02 43.61
qs_7_scaffold_21653 3 1606 bp 64.32 6.35 43.52
qs_7_scaffold_9298 9 7307 bp 47.75 7.42 43.52
qs_7_scaffold_12355 2 1758 bp 60.52 17.75 43.52
qs_7_scaffold_26548
Species: Natronomonas moolapensis (100%)
1 1510 bp 72.72 51.13 43.51
qs_7_scaffold_9932
Species: Kyrpidia tusciae (50%)
2 2084 bp 68.62 12.57 43.47
qs_7_scaffold_22212 3 1029 bp 68.51 11.86 43.44
qs_7_scaffold_21178
Species: Halalkalicoccus jeotgali (66.67%)
3 1078 bp 62.34 10.11 43.41
qs_7_scaffold_22193
Species: Scytonema millei (50%)
2 1030 bp 61.75 70.39 43.40
qs_7_scaffold_20506
Species: Halopiger xanaduensis (100%)
1 1113 bp 56.87 7.91 43.40
qs_7_scaffold_7287 4 2600 bp 45.46 8.62 43.38
qs_7_scaffold_11778
Class: Halobacteria (50%)
6 3628 bp 57.80 8.41 43.33
qs_7_scaffold_17154
Species: Haloarcula vallismortis (100%)
1 2106 bp 62.96 45.35 43.30
qs_7_scaffold_13936 4 2898 bp 56.56 6.59 43.27
qs_7_scaffold_35379
Species: Natronomonas moolapensis (100%)
1 1040 bp 72.69 60.87 43.27
qs_7_scaffold_31718 1 1214 bp 51.40 7.00 43.25
qs_7_scaffold_21774
Species: Halococcus salifodinae (100%)
1 1049 bp 58.63 16.11 43.18
qs_7_scaffold_14513 3 1536 bp 57.68 8.01 43.16
qs_7_scaffold_10484
Species: Halogranum salarium (100%)
1 2002 bp 50.05 6.99 43.16
qs_7_scaffold_17117
Species: Salinibacter ruber (100%)
2 1321 bp 61.09 24.15 43.15
qs_7_scaffold_18895
Species: RBG_13_RIF03_48_7_curated (50%)
2 1203 bp 54.28 8.65 43.14
qs_7_scaffold_9592 3 3171 bp 52.73 7.22 43.14
qs_7_scaffold_7252
Order: Halobacteriales (50%)
4 3304 bp 58.75 7.78 43.13
qs_7_scaffold_40246
Species: Halosimplex carlsbadense (50%)
2 1141 bp 55.48 6.57 43.12
qs_7_scaffold_10890 4 3120 bp 67.82 29.65 43.08
qs_7_scaffold_12434
Species: Haloarcula hispanica (100%)
4 4041 bp 58.75 10.94 43.06
qs_7_scaffold_27384
Species: Halorubrum coriense (100%)
2 2355 bp 56.48 6.11 43.06
qs_7_scaffold_26238
Species: Natrinema sp. J7-2 (50%)
2 2412 bp 59.33 69.82 43.03
qs_7_scaffold_13694
Order: Halobacteriales (60%)
5 4945 bp 63.58 60.40 43.01
qs_7_scaffold_22794
Species: Salinibacter ruber (100%)
1 1578 bp 67.62 29.15 42.97
qs_7_scaffold_17308 2 1307 bp 56.69 23.11 42.92
qs_7_scaffold_29530
Species: Halomicrobium mukohataei (50%)
2 1259 bp 68.31 29.63 42.89
qs_7_scaffold_22133 3 3115 bp 59.71 25.33 42.86
qs_7_scaffold_28878 1 1472 bp 44.57 7.20 42.80
qs_7_scaffold_18070 2 1255 bp 55.06 6.22 42.79
qs_7_scaffold_20279 5 2059 bp 45.99 6.12 42.79
qs_7_scaffold_19650
Order: Natrialbales (66.67%)
3 1159 bp 69.03 21.74 42.71
qs_7_scaffold_12216
Species: Halococcus saccharolyticus (75%)
4 2459 bp 64.70 32.61 42.70
qs_7_scaffold_15920 4 3921 bp 56.52 6.89 42.69
qs_7_scaffold_24186 2 1674 bp 53.58 23.24 42.65
qs_7_scaffold_18246
Species: Halococcus salifodinae (100%)
1 1245 bp 57.91 52.69 42.65
qs_7_scaffold_3700 7 3978 bp 55.81 8.09 42.61
qs_7_scaffold_19713 1 1155 bp 51.52 4.94 42.60
qs_7_scaffold_24364 3 1663 bp 55.32 6.49 42.57
qs_7_scaffold_11964 2 1805 bp 59.45 6.37 42.55
qs_7_scaffold_16313
Species: Haloferax lucentense (100%)
1 1382 bp 64.33 8.83 42.55
qs_7_scaffold_31320 2 1439 bp 51.08 5.56 42.53
qs_7_scaffold_19451
Species: Natronomonas pharaonis (50%)
2 1505 bp 65.98 33.49 42.46
qs_7_scaffold_22480 2 1018 bp 55.60 5.80 42.44
Displaying items 19451-19500 of 20203 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.