ggKbase home page
Advanced Search
Search Help

QS_7_UNK

In projects: QS_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.83 Longest contig: 259.33 Kbp Bin length: 60.91 Mbp GC content: 61.58 %
Contigs count: 20203 Features count: 77924 rRNAs count: 9 tRNAs count: 725

Genome completeness

megabin RP 50 / 55 MC: 45 BSCG 50 / 51 MC: 43 ASCG 38 / 38 MC: 38
Displaying items 19651-19700 of 20203 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_7_scaffold_35378
Species: Natronomonas pharaonis (50%)
2 1154 bp 70.19 35.62 38.73
qs_7_scaffold_19212 1 1185 bp 50.63 7.17 38.73
qs_7_scaffold_11530
Species: Natronomonas pharaonis (100%)
2 1859 bp 65.84 40.99 38.73
qs_7_scaffold_7744 3 2496 bp 54.37 6.17 38.70
qs_7_scaffold_6088 3 2917 bp 51.01 5.55 38.67
qs_7_scaffold_29869
Species: Natronomonas moolapensis (100%)
1 1443 bp 66.18 9.63 38.67
qs_7_scaffold_17829
Species: Nitrosococcus oceani (50%)
2 2056 bp 71.89 12.35 38.67
qs_7_scaffold_26297
Genus: Natronomonas (66.67%)
3 1521 bp 66.01 17.29 38.66
qs_7_scaffold_15087
Species: Halosimplex carlsbadense (75%)
4 2870 bp 65.85 10.77 38.57
qs_7_scaffold_8944 5 5048 bp 52.77 6.44 38.57
qs_7_scaffold_4689 5 4766 bp 53.50 6.48 38.54
qs_7_scaffold_16765
Species: Halogeometricum pallidum (50%)
2 2033 bp 60.40 6.49 38.51
qs_7_scaffold_5708 8 5300 bp 50.79 6.98 38.49
qs_7_scaffold_26900 3 1614 bp 55.33 5.95 38.48
qs_7_scaffold_13881
Species: Natrinema pellirubrum (50%)
2 1593 bp 65.10 7.22 38.42
qs_7_scaffold_27175
Species: Rhodothermus marinus (50%)
2 1815 bp 61.71 23.42 38.35
qs_7_scaffold_18737
Species: Haloarcula sinaiiensis (50%)
2 2036 bp 54.86 4.67 38.31
qs_7_scaffold_15757 4 2272 bp 59.38 11.71 38.29
qs_7_scaffold_17545
Species: Salinibacter ruber (50%)
4 3560 bp 55.06 48.01 38.26
qs_7_scaffold_14507
Species: Halostagnicola larsenii (50%)
2 1537 bp 54.26 7.61 38.26
qs_7_scaffold_10032
Species: Natronomonas moolapensis (50%)
2 2068 bp 66.78 42.46 38.15
qs_7_scaffold_7520 2 2548 bp 54.51 6.36 38.15
qs_7_scaffold_18379
Species: Polaromonas naphthalenivorans (50%)
2 1235 bp 58.79 16.92 38.14
qs_7_scaffold_21836
Species: Salinibacter ruber (100%)
1 1047 bp 60.84 49.76 38.11
qs_7_scaffold_19611
Species: RLO_PLX_64_10 (50%)
2 1161 bp 62.70 44.96 37.98
qs_7_scaffold_19723 1 1154 bp 40.29 4.77 37.95
qs_7_scaffold_11174
Species: uncultured archaeon A07HR60 (50%)
2 1907 bp 65.92 5.45 37.91
qs_7_scaffold_29416
Species: Volvox carteri (50%)
2 2195 bp 47.52 6.29 37.86
qs_7_scaffold_20847
Species: Haloterrigena limicola (100%)
1 1094 bp 47.35 6.03 37.84
qs_7_scaffold_15195
Species: Halosimplex carlsbadense (100%)
1 1475 bp 57.83 5.56 37.83
qs_7_scaffold_14051 2 1579 bp 51.17 5.57 37.81
qs_7_scaffold_18469
Species: Natronomonas pharaonis (50%)
2 1230 bp 63.98 8.21 37.80
qs_7_scaffold_2490
Class: Halobacteria (60%)
5 4920 bp 54.49 9.29 37.80
qs_7_scaffold_14039
Species: Salinibacter ruber (100%)
1 1580 bp 60.95 23.92 37.78
qs_7_scaffold_9985
Species: uncultured_archaeon_J07HX5 (50%)
2 2076 bp 57.80 56.98 37.72
qs_7_scaffold_15491
Genus: Halorubrum (66.67%)
3 1448 bp 53.31 15.54 37.71
qs_7_scaffold_14172 3 1568 bp 47.32 5.61 37.69
qs_7_scaffold_4436 4 4308 bp 51.86 6.69 37.67
qs_7_scaffold_10545 5 4048 bp 53.24 5.39 37.65
qs_7_scaffold_26664 3 2164 bp 61.14 20.70 37.57
qs_7_scaffold_12956
Species: Salinibacter ruber (50%)
2 1686 bp 60.97 7.77 37.54
qs_7_scaffold_19637 1 1160 bp 69.66 41.98 37.50
qs_7_scaffold_18753 2 1211 bp 52.85 11.48 37.41
qs_7_scaffold_4975 5 3321 bp 52.82 6.96 37.40
qs_7_scaffold_20259
Species: Salinibacter ruber (50%)
2 1124 bp 58.81 20.82 37.37
qs_7_scaffold_18088 3 1255 bp 57.05 33.33 37.29
qs_7_scaffold_19952
Species: Salinibacter ruber (50%)
2 2709 bp 56.63 37.25 37.21
qs_7_scaffold_9950
Species: Natronomonas pharaonis (100%)
2 2082 bp 57.68 15.71 37.18
qs_7_scaffold_17902 2 1268 bp 57.73 11.83 37.15
qs_7_scaffold_17303
Species: Halococcus hamelinensis (100%)
1 2093 bp 65.98 15.34 37.12
Displaying items 19651-19700 of 20203 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.