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QS_7_UNK

In projects: QS_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.83 Longest contig: 259.33 Kbp Bin length: 60.91 Mbp GC content: 61.58 %
Contigs count: 20203 Features count: 77924 rRNAs count: 9 tRNAs count: 725

Genome completeness

megabin RP 50 / 55 MC: 45 BSCG 50 / 51 MC: 43 ASCG 38 / 38 MC: 38
Displaying items 201-250 of 20203 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_7_scaffold_9976 2 3207 bp 54.85 6.21 100.94
qs_7_scaffold_18880
Species: Halosimplex carlsbadense (75%)
4 1204 bp 69.68 7.72 100.91
qs_7_scaffold_18772
Genus: Halococcus (66.67%)
3 1210 bp 66.53 21.65 100.91
qs_7_scaffold_20455
Species: Haloarcula japonica (50%)
2 1115 bp 69.06 7.80 100.90
qs_7_scaffold_20468
Species: Haladaptatus paucihalophilus (50%)
2 1115 bp 73.27 8.97 100.90
qs_7_scaffold_16889
Order: Halobacteriales (50%)
4 1338 bp 69.36 39.09 100.90
qs_7_scaffold_9656
Species: Haloarcula vallismortis (50%)
2 2126 bp 66.46 7.53 100.89
qs_7_scaffold_20272
Species: Halovivax asiaticus (100%)
2 1124 bp 73.40 12.37 100.89
qs_7_scaffold_22497
Class: Halobacteria (66.67%)
3 1017 bp 59.39 7.37 100.89
qs_7_scaffold_18170 3 1249 bp 68.13 8.81 100.88
qs_7_scaffold_22290
Species: Haloarcula vallismortis (100%)
2 1026 bp 63.45 9.94 100.88
qs_7_scaffold_14777
Species: Halococcus salifodinae (75%)
4 2558 bp 70.37 67.75 100.86
qs_7_scaffold_17639
Species: Haloferax sp. ATCC BAA-645 (50%)
2 1285 bp 73.31 19.14 100.86
qs_7_scaffold_19488
Species: Salinibacter ruber (100%)
2 1169 bp 63.90 47.56 100.86
qs_7_scaffold_14692
Species: RBG_16_NC10_65_8_curated (50%)
2 1520 bp 63.62 5.00 100.86
qs_7_scaffold_13071
Domain: Bacteria (66.67%)
3 1675 bp 62.39 4.60 100.84
qs_7_scaffold_20769
Species: Salinibacter ruber (50%)
2 1098 bp 64.85 36.43 100.82
qs_7_scaffold_29225
Order: Natrialbales (66.67%)
3 1357 bp 60.94 10.54 100.81
qs_7_scaffold_18299 2 1241 bp 52.70 9.43 100.81
qs_7_scaffold_22912 3 1000 bp 62.90 8.00 100.80
qs_7_scaffold_22756
Species: Halobacterium salinarum (66.67%)
3 1006 bp 61.23 36.78 100.79
qs_7_scaffold_7924
Species: Natronomonas moolapensis (62.5%)
8 3355 bp 68.44 72.88 100.77
qs_7_scaffold_12915 4 1691 bp 59.20 7.04 100.77
qs_7_scaffold_16482
Species: Haloarcula japonica (50%)
2 1956 bp 43.00 5.98 100.77
qs_7_scaffold_21873
Species: uncultured archaeon A07HB70 (50%)
2 1045 bp 68.23 5.84 100.77
qs_7_scaffold_12557
Species: Haladaptatus paucihalophilus (66.67%)
3 1733 bp 62.95 9.41 100.75
qs_7_scaffold_26173
Species: Salinibacter ruber (100%)
2 1477 bp 65.34 32.02 100.74
qs_7_scaffold_8742
Species: marine sediment metagenome (50%)
2 2296 bp 70.47 76.87 100.74
qs_7_scaffold_6741
Order: Halobacteriales (66.67%)
3 2734 bp 70.56 42.47 100.73
qs_7_scaffold_14859 2 1504 bp 61.04 5.32 100.73
qs_7_scaffold_20110
Species: Natronomonas pharaonis (50%)
2 1132 bp 72.17 13.78 100.71
qs_7_scaffold_19968 3 1141 bp 62.58 6.75 100.70
qs_7_scaffold_17608
Species: Haloarcula argentinensis (50%)
2 1287 bp 67.06 7.77 100.70
qs_7_scaffold_19791
Domain: Bacteria (66.67%)
3 1150 bp 47.39 8.17 100.70
qs_7_scaffold_12583
Species: Haladaptatus paucihalophilus (100%)
2 1731 bp 60.31 9.71 100.69
qs_7_scaffold_22662
Species: Halostagnicola larsenii (50%)
2 1010 bp 61.78 32.67 100.69
qs_7_scaffold_10508
Species: Halorubrum saccharovorum (50%)
4 3045 bp 67.91 16.68 100.69
qs_7_scaffold_18986
Species: Haloarcula amylolytica (66.67%)
3 1198 bp 60.68 6.93 100.67
qs_7_scaffold_17048
Species: Salinibacter ruber (66.67%)
3 2247 bp 61.24 9.43 100.67
qs_7_scaffold_14900
Species: Natronomonas moolapensis (50%)
2 1502 bp 68.51 20.84 100.67
qs_7_scaffold_28044
Species: Natrinema altunense (50%)
4 1511 bp 58.50 8.74 100.66
qs_7_scaffold_21540
Species: Halogeometricum pallidum (50%)
2 1061 bp 70.03 20.55 100.66
qs_7_scaffold_25889
Species: Haladaptatus paucihalophilus (50%)
2 1398 bp 69.31 7.15 100.64
qs_7_scaffold_14233
Class: Halobacteria (66.67%)
3 1562 bp 78.68 18.25 100.64
qs_7_scaffold_20711
Species: Haloarcula vallismortis (50%)
2 1100 bp 69.00 6.64 100.64
qs_7_scaffold_17483
Species: Haloarcula hispanica (66.67%)
3 1294 bp 69.40 8.19 100.62
qs_7_scaffold_19946
Species: Natronomonas moolapensis (50%)
2 1142 bp 54.99 7.71 100.61
qs_7_scaffold_21541
Species: Halovivax ruber (75%)
4 1801 bp 62.97 6.89 100.61
qs_7_scaffold_11952
Species: Salinibacter ruber (100%)
2 1807 bp 64.91 46.65 100.61
qs_7_scaffold_17084
Species: Halogranum salarium (50%)
2 1324 bp 69.03 20.69 100.60
Displaying items 201-250 of 20203 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.