ggKbase home page

qs_7_scaffold_6350_1

Organism: QS_7_Halococcus_68_65

near complete RP 26 / 55 MC: 4 BSCG 16 / 51 ASCG 32 / 38 MC: 1
Location: 2..688

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1A8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 227.0
  • Bit_score: 413
  • Evalue 1.10e-112
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 227.0
  • Bit_score: 413
  • Evalue 1.50e-112
transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 226.0
  • Bit_score: 394
  • Evalue 1.50e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus hamelinensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 687
GGCTGGCAGGACAAAGACGCCTACGGGAATTCCCTTTCCAGCCGCCAGCGCCAGAAGATGCAGCGCCTGCGCACCTGGAACGAGCGCTTCCGCACCCGTGACTCCAAGGAGCGCAACCTCAAGCAGGCCCTCGGCGAGATCGATCGGATGGCGAGCGCGCTCGGTCTTCCCGATTCGGTGCGCGAGACCGCCTCCGTGATCTACCGCCGGGCGCTCGACGAGGACCTCCTCCCCGGGCGCTCGATCGAGGGCGTCTCCACCTCCGCGCTCTACGCCGCCGCCCGACAGGCCGGCACGCCCCGCTCGCTCGACGAAATCGCCACCGTCTCACGGGTCGGGAAGATGGAGCTCACCAGAACCTACCGGTACGTGGTTCGCGAGCTCGGCCTGGAGATCCAGCCCGCCGACCCCGCGAGCTACGTCCCCCGGTTCGCCTCCGACCTCGACCTCTCCGAGGAGGCCGAACGACGCGCCCGACAGCTCCTCGATACCGCGAAGGCCGAAGGCGTCCACAGCGGGAAGAGCCCCGTCGGGCTGGCGGCGGCCGCGGTCTACGCCGCCGCGTTGCTCACCAACGAGAAGGTCACTCAGGGAGCCGTCTCGGAGGTCGCCGACATCTCCGAGGTCACCATCCGGAATCGGTATCACGAACTGCTCGAAGCCGAAGAGCAGATCCAGGCCCCATAG
PROTEIN sequence
Length: 229
GWQDKDAYGNSLSSRQRQKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDSVRETASVIYRRALDEDLLPGRSIEGVSTSALYAAARQAGTPRSLDEIATVSRVGKMELTRTYRYVVRELGLEIQPADPASYVPRFASDLDLSEEAERRARQLLDTAKAEGVHSGKSPVGLAAAAVYAAALLTNEKVTQGAVSEVADISEVTIRNRYHELLEAEEQIQAP*