ggKbase home page
Advanced Search
Search Help

QS_7_Bacteroidetes_Order_II__Incertae_sedis_67_15

In projects: QS_7

Consensus taxonomy: Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: QS_7_UNK

Properties

Avg. coverage: 14.89 Longest contig: 50.72 Kbp Bin length: 1.87 Mbp GC content: 67.44 %
Contigs count: 143 Features count: 1741 rRNAs count: 0 tRNAs count: 24

Genome completeness

near complete RP 50 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38
Displaying items 51-100 of 143 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_7_scaffold_3814
Species: Salinibacter ruber (50%)
6 3910 bp 67.29 14.42 86.47
qs_7_scaffold_880
Species: Salinibacter ruber (58.33%)
12 12919 bp 66.96 14.43 86.64
qs_7_scaffold_1737
Species: Salinibacter ruber (50%)
4 6022 bp 69.08 14.45 91.51
qs_7_scaffold_914
Order: Bacteroidetes Order II. Incertae sedis (77.78%)
9 8666 bp 68.17 14.46 88.14
qs_7_scaffold_3894
Species: Salinibacter ruber (57.14%)
7 6350 bp 68.33 14.46 79.46
qs_7_scaffold_1327
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
9 10336 bp 68.07 14.46 87.51
qs_7_scaffold_6832
Species: Salinibacter ruber (50%)
4 3253 bp 69.78 14.47 89.09
qs_7_scaffold_957
Order: Bacteroidetes Order II. Incertae sedis (63.64%)
11 12808 bp 67.77 14.48 80.29
qs_7_scaffold_1592
Species: Salinibacter ruber (60%)
10 10728 bp 66.59 14.49 80.59
qs_7_scaffold_564
Species: Salinibacter ruber (50%)
6 11062 bp 68.03 14.50 90.44
qs_7_scaffold_127
Species: Salinibacter ruber (50%)
22 29868 bp 66.57 14.54 89.51
qs_7_scaffold_3666
Order: Bacteroidetes Order II. Incertae sedis (50%)
6 6291 bp 67.10 14.56 84.55
qs_7_scaffold_2429
Species: Salinibacter ruber (60%)
5 5000 bp 67.06 14.58 88.20
qs_7_scaffold_1156
Species: Salinibacter ruber (50%)
6 7591 bp 67.05 14.58 85.47
qs_7_scaffold_867
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
12 10948 bp 68.51 14.61 87.71
qs_7_scaffold_4252
Species: Salinibacter ruber (62.5%)
8 8240 bp 67.37 14.65 81.59
qs_7_scaffold_642
Order: Bacteroidetes Order II. Incertae sedis (50%)
24 28572 bp 68.21 14.66 84.19
qs_7_scaffold_4212
Species: Salinibacter ruber (75%)
4 4750 bp 68.44 14.69 83.18
qs_7_scaffold_509
Species: Salinibacter ruber (70%)
10 11759 bp 64.32 14.70 86.97
qs_7_scaffold_341
Species: Salinibacter ruber (56.52%)
23 21405 bp 67.90 14.75 86.59
qs_7_scaffold_3223
Species: Salinibacter ruber (66.67%)
6 5940 bp 68.62 14.78 91.92
qs_7_scaffold_542
Species: Salinibacter ruber (87.5%)
8 11359 bp 68.83 14.80 83.59
qs_7_scaffold_339
Order: Bacteroidetes Order II. Incertae sedis (54.55%)
11 14218 bp 68.46 14.81 83.51
qs_7_scaffold_619
Order: Bacteroidetes Order II. Incertae sedis (56.41%)
39 46247 bp 67.50 14.85 86.36
qs_7_scaffold_2518
Order: Bacteroidetes Order II. Incertae sedis (60%)
5 4888 bp 65.71 14.85 94.64
qs_7_scaffold_4072
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
6 5115 bp 68.74 14.86 83.81
qs_7_scaffold_1100
Species: Salinibacter ruber (58.33%)
12 11624 bp 68.78 14.88 85.71
qs_7_scaffold_4223
Species: Salinibacter ruber (50%)
4 3679 bp 68.58 14.95 86.52
qs_7_scaffold_722
Species: Rhodothermus marinus (52.94%)
17 25936 bp 68.33 14.95 89.55
qs_7_scaffold_224
Order: Bacteroidetes Order II. Incertae sedis (56.86%)
51 49453 bp 67.37 14.97 80.65
qs_7_scaffold_4601
Species: Rhodothermus marinus (50%)
8 7498 bp 69.58 14.98 86.46
qs_7_scaffold_1413
Species: Salinibacter ruber (54.55%)
11 12772 bp 67.01 14.99 78.34
qs_7_scaffold_734
Species: Salinibacter ruber (62.5%)
8 10628 bp 69.42 15.00 89.25
qs_7_scaffold_309
Order: Bacteroidetes Order II. Incertae sedis (53.85%)
26 31873 bp 66.99 15.00 85.63
qs_7_scaffold_1143
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
9 10569 bp 67.70 15.03 82.88
qs_7_scaffold_5457
Species: Salinibacter ruber (75%)
4 3127 bp 66.87 15.03 83.08
qs_7_scaffold_425
Order: Bacteroidetes Order II. Incertae sedis (56.52%)
23 26793 bp 68.64 15.05 85.80
qs_7_scaffold_474
Order: Bacteroidetes Order II. Incertae sedis (51.72%)
29 30259 bp 67.86 15.05 86.41
qs_7_scaffold_852
Species: Salinibacter ruber (50%)
10 8915 bp 67.11 15.06 87.43
qs_7_scaffold_430
Order: Bacteroidetes Order II. Incertae sedis (78.38%)
37 29146 bp 65.18 15.06 84.12
qs_7_scaffold_2936
Species: Rhodothermus marinus (50%)
6 5427 bp 67.13 15.07 90.75
qs_7_scaffold_3844
Order: Bacteroidetes Order II. Incertae sedis (63.64%)
11 10969 bp 69.01 15.12 90.31
qs_7_scaffold_1194
Species: Salinibacter ruber (62.5%)
8 7473 bp 67.32 15.13 82.58
qs_7_scaffold_1205
Species: Salinibacter ruber (54.55%)
22 22703 bp 66.71 15.14 83.09
qs_7_scaffold_617
Species: Salinibacter ruber (50%)
14 15895 bp 68.44 15.17 82.37
qs_7_scaffold_244
Species: Salinibacter ruber (54.17%)
24 35353 bp 65.52 15.19 83.62
qs_7_scaffold_1182
Order: Bacteroidetes Order II. Incertae sedis (71.43%)
7 7907 bp 67.81 15.19 82.22
qs_7_scaffold_798
Species: Salinibacter ruber (62.96%)
27 30219 bp 67.81 15.27 83.15
qs_7_scaffold_262
Order: Bacteroidetes Order II. Incertae sedis (58.33%)
36 37827 bp 67.80 15.29 83.68
qs_7_scaffold_808
Order: Bacteroidetes Order II. Incertae sedis (60%)
10 9190 bp 66.74 15.31 79.16
Displaying items 51-100 of 143 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.