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qs_8_scaffold_296_23

Organism: QS_8_Oscillatoriophycideae_48_54

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(23179..23859)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0003601490 similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 222.0
  • Bit_score: 364
  • Evalue 9.90e-98
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 217.0
  • Bit_score: 355
  • Evalue 9.90e-96
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AFY76806.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 217.0
  • Bit_score: 355
  • Evalue 4.90e-95

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Taxonomy

Pleurocapsa minor → Pleurocapsa → Pleurocapsales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTGCGCCCCGATGACAAGTCTATGAGTCAATCAATTTCTGTATCTTGGTCAACGGCTGAGGTGAAAGTTCCTCAAAAATCGGTGCCCTGCGACAAACTCTCGAACTACGATTTGATTTTGCGATGTCAGGAAGGAATTCAACCTGATCGGGAAGCTTTTGCTGAACTGCTGCACCGCTATAACTCTCACGTCGAAAAGATTTTGTACCACTTGGCACCAGACTGGCATGATCGCGCTGACTTAGCGCAAGAAGTCTGGATTAGGGCATATCGCAAAATCAAGCGCGTGCAGGAACCCGCCAAGTTTCGGGGGTGGTTGAGCCGGATTGCGACTAACTTGTTTTACGATGAGCTACGCAAGCGCAAGCGGGTTAGACATCCCTTATCCCTAGACGCTCCCCGTCAAATGGACGATGGTGAGGTAGAGTGGGAAGTAGCCTCGGATGCTCCCAGTCCTGATGAAGACTTGAGTACACAGGAGTTTTACGAGCAGCTTCGCGTGGCGATCGCGGATTTGCCAGAAGCTTTTCGTACCACCATTGTTCTCCGAGAAATTGAAGGCATGCCCTACGAAGAAATTGCTGAAGTTACAGGCGTTTCTTTGGGAACAGTGAAGTCTAGAATTGCCAGAGCAAGAACGAGACTCCAATCTGTACTACAAAATTATCTCGATGTAGACTAA
PROTEIN sequence
Length: 227
VRPDDKSMSQSISVSWSTAEVKVPQKSVPCDKLSNYDLILRCQEGIQPDREAFAELLHRYNSHVEKILYHLAPDWHDRADLAQEVWIRAYRKIKRVQEPAKFRGWLSRIATNLFYDELRKRKRVRHPLSLDAPRQMDDGEVEWEVASDAPSPDEDLSTQEFYEQLRVAIADLPEAFRTTIVLREIEGMPYEEIAEVTGVSLGTVKSRIARARTRLQSVLQNYLDVD*