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qs_8_scaffold_1079_9

Organism: QS_8_Actinobacteria_72_14

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(8120..8887)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036C51C6 similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 249.0
  • Bit_score: 303
  • Evalue 1.80e-79
FliA/WhiG family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 252.0
  • Bit_score: 298
  • Evalue 2.10e-78
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily {ECO:0000313|EMBL:EFC84896.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 253.0
  • Bit_score: 298
  • Evalue 8.10e-78

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGAGCAACGCCTCGTCGTACACGCGCGAGGACACCAAGGAGCTGTTCCGCGAGCTTCGCGAGACCGGCGACCCCGAGGTGCGCGAGACCCTGGCGCGGCTGCACCTGCCGTTGGTGGAATACCTCGCGCGGCGCTTCAAGGACCGCGGCGAGCCCATCGAGGACCTGGTGCAGGTGGGATCGGTGGGCCTGCTGAAGGCGATCGACCGCTTCGACGTCGATCGCGGCGTGGAGTTCTCCACCTACGCCACCCCCACGATCGTCGGTGAGCTCAAGCGCTACTTCCGCGACAAGGGCTGGGCCGTGCGGGTGCCGCGGCGCCTGCAGGAGCTGTCGCTGCGGCTGAACAAGATCGTGGCCCAGCTGACCCAAGAGCTCGGGCGCAGCCCCACCGTGTCGGAGCTGGCACAGGCGGCCGAGGTCGGCGAGGAGGAGGTCCTGGAAGCCCTGGAGTCCGGGCAGGCGTACTCCACGGCCTCGCTGGACGCCCCCTCCGGCGAGGAGGACGACGCCCCGGGGCGCGTGGAGCGCATGGGCGACGAGGACGTCCAGTTGGAGAACCTGGAGTACTTCGCGTCCCTGGCCCCGCTGATCCAGCAGCTGCCCGAGCGCGAGCGCACCATCCTGTACCTGCGGTTCTTTCAGGGGCTGACCCAGTCGGGGATCGCCGAGGAAGTGGGCATCAGCCAGATGCACGTGTCCCGGCTGCTGTCGCGCATCCTGGGCTATCTGCGCGACGGCATGGTGGGCGCGGACCAGGAGGCCTAG
PROTEIN sequence
Length: 256
MSNASSYTREDTKELFRELRETGDPEVRETLARLHLPLVEYLARRFKDRGEPIEDLVQVGSVGLLKAIDRFDVDRGVEFSTYATPTIVGELKRYFRDKGWAVRVPRRLQELSLRLNKIVAQLTQELGRSPTVSELAQAAEVGEEEVLEALESGQAYSTASLDAPSGEEDDAPGRVERMGDEDVQLENLEYFASLAPLIQQLPERERTILYLRFFQGLTQSGIAEEVGISQMHVSRLLSRILGYLRDGMVGADQEA*