ggKbase | organisms

QS_8_Viruses_58_10

In projects: QS_8 | phage-plasmid-virus-protein-families

Consensus taxonomy: Viruses

Metagenomic Context

Parent: QS_8_UNK

Properties

Avg. coverage: 10.36 Longest contig: 4.77 Kbp Bin length: 105.56 Kbp GC content: 58.47 %

Contigs count: 61 Features count: 149 rRNAs count: 0 tRNAs count: 1

Genome completeness

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38

Displaying items 1-50 of 61 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
qs_8_scaffold_4563 Species: Halovirus HHTV-1 (50%)	10	4770 bp	66.39	21.72	95.53
qs_8_scaffold_8247 Species: Halovirus HHTV-1 (50%)	8	4017 bp	65.15	19.92	99.03
qs_8_scaffold_6506 Species: Halovirus HCTV-2 (50%)	4	3356 bp	66.90	29.77	94.40
qs_8_scaffold_19294 Domain: Viruses (50%)	4	1549 bp	50.87	4.84	91.99
qs_8_scaffold_8126 Species: Halorubrum phage GNf2 (50%)	4	2890 bp	54.71	7.47	92.18
qs_8_scaffold_25793 Species: Halovirus HHTV-2 (50%)	4	2083 bp	62.79	25.49	73.88
qs_8_scaffold_36302 Species: Halorubrum pleomorphic virus 3 (50%)	4	2342 bp	56.87	6.83	52.65
qs_8_scaffold_21631 Domain: Viruses (50%)	4	1419 bp	63.07	18.89	97.46
qs_8_scaffold_17886 Species: Halovirus HCTV-1 (50%)	4	1639 bp	55.89	5.43	99.94
qs_8_scaffold_48822 Domain: Viruses (66.67%)	3	1370 bp	59.12	5.18	97.45
qs_8_scaffold_26070 Domain: Viruses (66.67%)	3	1225 bp	60.90	5.80	98.20
qs_8_scaffold_11558 Species: Halovirus HGTV-1 (66.67%)	3	2260 bp	50.62	4.65	97.96
qs_8_scaffold_36758 Species: Halovirus HGTV-1 (66.67%)	3	1886 bp	39.77	5.30	61.24
qs_8_scaffold_21197 Species: Halovirus HGTV-1 (66.67%)	3	1441 bp	54.34	4.30	90.35
qs_8_scaffold_44088 Species: Halovirus HGTV-1 (100%)	3	1239 bp	52.22	5.57	102.66
qs_8_scaffold_17894 Domain: Viruses (66.67%)	3	1639 bp	61.32	6.28	85.85
qs_8_scaffold_24128 Domain: Viruses (66.67%)	3	1304 bp	60.58	8.36	72.47
qs_8_scaffold_20721 Species: Halovirus HHTV-1 (50%)	2	1466 bp	62.55	9.07	70.19
qs_8_scaffold_28743 Species: Halovirus HHTV-1 (50%)	2	1135 bp	63.88	12.95	90.13
qs_8_scaffold_23934 Species: Halovirus HGTV-1 (50%)	2	1311 bp	62.01	10.07	98.63
qs_8_scaffold_20039 Species: Halovirus HCTV-1 (50%)	2	1503 bp	51.10	5.39	90.82
qs_8_scaffold_31078 Species: Halovirus HRTV-7 (50%)	2	1065 bp	47.61	4.79	73.52
qs_8_scaffold_38566 Species: Halovirus HCTV-1 (50%)	2	1503 bp	52.23	4.59	80.84
qs_8_scaffold_10118 Species: Halorubrum phage GNf2 (100%)	2	2487 bp	53.68	7.16	99.52
qs_8_scaffold_28069 Species: Halovirus HCTV-5 (50%)	2	1158 bp	60.19	14.25	73.83
qs_8_scaffold_13580 Species: Environmental Halophage eHP-31 (50%)	2	2014 bp	59.68	11.02	100.25
qs_8_scaffold_12895 Species: Rhizobium phage RHEph10 (50%)	2	2089 bp	71.42	11.82	83.87
qs_8_scaffold_16885 Species: Halovirus HF1 (50%)	2	1713 bp	52.83	3.91	59.19
qs_8_scaffold_31573 Species: Halovirus HCTV-5 (50%)	2	1050 bp	52.00	6.86	99.71
qs_8_scaffold_39893 Species: Halovirus HHTV-1 (50%)	2	1948 bp	61.40	28.13	63.14
qs_8_scaffold_21330 Species: Halovirus HGTV-1 (50%)	2	1435 bp	53.31	7.11	98.47
qs_8_scaffold_25359 Species: Halovirus HGTV-1 (50%)	2	1254 bp	47.05	5.34	99.76
qs_8_scaffold_29049 Species: Halovirus HGTV-1 (50%)	2	1125 bp	52.00	3.64	99.47
qs_8_scaffold_13622 Species: Halorubrum phage CGphi46 (50%)	2	2009 bp	65.11	10.20	99.75
qs_8_scaffold_31824 Species: Halovirus HCTV-5 (50%)	2	1043 bp	67.40	7.09	76.89
qs_8_scaffold_22173 Species: Halovirus HHTV-2 (50%)	2	1393 bp	66.83	21.82	99.93
qs_8_scaffold_29997 Species: Halovirus HRTV-7 (50%)	2	1097 bp	62.72	6.65	94.62
qs_8_scaffold_13644 Species: Halovirus HCTV-1 (50%)	2	2007 bp	53.61	5.08	92.97
qs_8_scaffold_30465 Species: Environmental Halophage eHP-1 (50%)	2	1083 bp	61.13	7.39	90.86
qs_8_scaffold_15722 Species: Halovirus HHTV-1 (50%)	2	1808 bp	50.22	4.48	100.06
qs_8_scaffold_29552 Species: Halovirus HRTV-8 (50%)	2	1110 bp	47.30	4.23	87.84
qs_8_scaffold_17599 Species: Environmental Halophage eHP-19 (50%)	2	1659 bp	66.18	6.63	100.00
qs_8_scaffold_19153 Species: Salisaeta icosahedral phage 1 (50%)	2	1558 bp	64.44	12.45	93.77
qs_8_scaffold_51016 Species: Halorubrum phage CGphi46 (50%)	2	1139 bp	64.18	33.36	103.51
qs_8_scaffold_27265 Species: Halovirus HHTV-2 (50%)	2	1185 bp	53.00	4.89	88.35
qs_8_scaffold_22038 Species: Halovirus HRTV-7 (50%)	2	2181 bp	42.87	4.08	74.55
qs_8_scaffold_18385 Species: Halovirus HHTV-1 (50%)	2	2951 bp	64.49	12.17	98.41
qs_8_scaffold_17211 Species: Halovirus HCTV-5 (50%)	2	1687 bp	48.84	4.68	91.94
qs_8_scaffold_24565 Species: Halovirus HGTV-1 (50%)	2	1285 bp	53.15	5.68	98.05
qs_8_scaffold_32890 Species: Halovirus HHTV-1 (50%)	2	1944 bp	66.41	8.59	80.40

Displaying items 1-50 of 61 in total

QS_8_Viruses_58_10

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

QS_8_Viruses_58_10

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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