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QS_9_UNK

In projects: QS_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.01 Longest contig: 255.34 Kbp Bin length: 53.74 Mbp GC content: 62.24 %
Contigs count: 17166 Features count: 68256 rRNAs count: 6 tRNAs count: 714

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 45 / 51 MC: 39 ASCG 38 / 38 MC: 38
Displaying items 501-550 of 17166 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_9_scaffold_19500
Species: Halobacterium salinarum (100%)
1 1067 bp 66.64 31.12 42.17
qs_9_scaffold_18991
Species: Salinibacter ruber (50%)
2 1095 bp 56.89 5.21 42.19
qs_9_scaffold_7897
Species: Salinibacter ruber (100%)
1 2481 bp 57.92 21.68 42.20
qs_9_scaffold_6768
Phylum: Cyanobacteria (57.14%)
7 6104 bp 49.89 34.58 42.22
qs_9_scaffold_11460
Species: Natronomonas pharaonis (50%)
2 1782 bp 61.28 21.32 42.26
qs_9_scaffold_12469
Class: Oscillatoriophycideae (66.67%)
3 1646 bp 41.07 11.91 42.28
qs_9_scaffold_14405
Class: Halobacteria (66.67%)
3 1433 bp 70.20 12.98 42.29
qs_9_scaffold_25696
Species: Halobacterium sp. DL1 (50%)
2 1514 bp 56.80 7.20 42.40
qs_9_scaffold_13208
Species: Halopiger xanaduensis (50%)
2 1561 bp 64.06 15.05 42.47
qs_9_scaffold_19140 1 1087 bp 51.89 42.23 42.50
qs_9_scaffold_12930
Species: Haloferax gibbonsii (100%)
1 1593 bp 70.37 14.25 42.56
qs_9_scaffold_20267
Species: Halococcus salifodinae (100%)
1 1621 bp 49.72 9.62 42.57
qs_9_scaffold_17327
Species: Halorubrum kocurii (50%)
2 1198 bp 58.60 6.09 42.57
qs_9_scaffold_16398
Species: Halostagnicola sp. A56 (50%)
2 2049 bp 54.03 18.25 42.61
qs_9_scaffold_3884
Class: Halobacteria (87.5%)
8 10187 bp 59.31 13.04 42.61
qs_9_scaffold_18123
Species: Natronomonas moolapensis (50%)
2 1147 bp 51.35 6.36 42.63
qs_9_scaffold_9351 4 3335 bp 64.20 13.67 42.64
qs_9_scaffold_14058
Species: Natronomonas moolapensis (50%)
2 1470 bp 65.85 41.02 42.65
qs_9_scaffold_12001
Domain: Archaea (50%)
4 1707 bp 59.29 10.08 42.71
qs_9_scaffold_15800
Species: Halostagnicola larsenii (50%)
2 1312 bp 52.74 44.97 42.76
qs_9_scaffold_14788
Species: Salinibacter ruber (100%)
1 1396 bp 61.10 16.83 42.77
qs_9_scaffold_13380
Species: Halococcus saccharolyticus (50%)
2 1543 bp 59.69 12.90 42.77
qs_9_scaffold_14911
Species: Salinibacter ruber (50%)
2 1386 bp 56.06 13.06 42.86
qs_9_scaffold_8674
Species: Gloeocapsa sp. PCC 7428 (50%)
2 2289 bp 44.47 17.96 42.86
qs_9_scaffold_17035 2 1218 bp 48.77 11.25 42.86
qs_9_scaffold_19650
Species: Halonotius sp. J07HN4 (50%)
2 1057 bp 50.52 4.73 42.86
qs_9_scaffold_17253
Class: Halobacteria (75%)
4 2380 bp 53.49 7.86 42.86
qs_9_scaffold_20326
Species: Halococcus morrhuae (66.67%)
3 1671 bp 50.51 56.73 42.91
qs_9_scaffold_16981 1 1223 bp 55.68 11.53 42.93
qs_9_scaffold_4487
Class: Halobacteria (60%)
5 6393 bp 50.41 6.13 42.94
qs_9_scaffold_13181
Order: Halobacteriales (66.67%)
3 1565 bp 60.06 10.80 42.94
qs_9_scaffold_18069 3 1907 bp 54.38 6.08 42.95
qs_9_scaffold_21812
Species: Halogranum salarium (100%)
1 1794 bp 46.10 3.96 42.98
qs_9_scaffold_17540 3 1182 bp 63.54 7.02 42.98
qs_9_scaffold_14642
Species: Natronomonas moolapensis (100%)
2 1409 bp 65.29 48.55 43.01
qs_9_scaffold_14882
Species: Halonotius sp. J07HN4 (50%)
2 1388 bp 67.36 26.01 43.01
qs_9_scaffold_18637 1 1115 bp 49.78 13.90 43.05
qs_9_scaffold_28166
Species: Haloarcula vallismortis (50%)
2 1282 bp 52.18 15.37 43.06
qs_9_scaffold_14313
Species: Natronomonas pharaonis (50%)
2 1442 bp 67.13 22.68 43.07
qs_9_scaffold_10119
Species: Halococcus salifodinae (66.67%)
3 2894 bp 54.08 20.08 43.12
qs_9_scaffold_25419
Species: Halomicrobium mukohataei (50%)
2 1718 bp 58.61 6.98 43.13
qs_9_scaffold_27258
Species: Natronomonas pharaonis (50%)
2 1342 bp 58.20 7.23 43.14
qs_9_scaffold_23426
Species: Halarchaeum acidiphilum (50%)
2 1265 bp 65.38 54.78 43.16
qs_9_scaffold_13469
Species: halophilic archaeon J07HX5 (66.67%)
3 2203 bp 67.50 27.01 43.17
qs_9_scaffold_9369
Species: Nitratireductor pacificus (50%)
2 2137 bp 56.29 6.04 43.24
qs_9_scaffold_5500 5 3315 bp 56.74 8.96 43.26
qs_9_scaffold_17811
Species: Halogeometricum borinquense (100%)
1 1165 bp 47.30 6.35 43.26
qs_9_scaffold_18847
Species: Halococcus thailandensis (50%)
2 1102 bp 55.99 22.14 43.28
qs_9_scaffold_10237
Species: Halorubrum hochstenium (50%)
2 1974 bp 55.42 10.18 43.31
qs_9_scaffold_23825
Species: Natronomonas pharaonis (50%)
2 1515 bp 68.32 31.49 43.37
Displaying items 501-550 of 17166 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.