ggKbase home page
Advanced Search
Search Help

QS_9_UNK

In projects: QS_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.01 Longest contig: 255.34 Kbp Bin length: 53.74 Mbp GC content: 62.24 %
Contigs count: 17166 Features count: 68256 rRNAs count: 6 tRNAs count: 714

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 45 / 51 MC: 39 ASCG 38 / 38 MC: 38
Displaying items 16901-16950 of 17166 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_9_scaffold_14635 3 1410 bp 66.24 5.53 100.43
qs_9_scaffold_10912
Species: Halostagnicola sp. A56 (75%)
4 1864 bp 66.20 26.77 100.43
qs_9_scaffold_10985
Order: Halobacteriales (66.67%)
3 1852 bp 57.40 6.86 100.43
qs_9_scaffold_18264
Species: Halorhabdus utahensis (50%)
2 1138 bp 72.41 8.35 100.44
qs_9_scaffold_26176
Species: Halomicrobium mukohataei (100%)
3 1365 bp 64.54 12.31 100.44
qs_9_scaffold_13078 3 1577 bp 45.28 6.47 100.44
qs_9_scaffold_11343
Species: Haloarcula marismortui (50%)
2 1801 bp 69.07 37.98 100.44
qs_9_scaffold_2975
Domain: Bacteria (60%)
5 5092 bp 61.70 8.66 100.45
qs_9_scaffold_18858
Species: Natronomonas pharaonis (50%)
2 1102 bp 68.51 14.61 100.45
qs_9_scaffold_11626
Order: Halobacteriales (66.67%)
3 1759 bp 71.29 25.92 100.46
qs_9_scaffold_18914
Species: Haloquadratum walsbyi (50%)
2 1099 bp 56.96 6.10 100.46
qs_9_scaffold_6671
Class: Halobacteria (100%)
3 2843 bp 43.72 5.38 100.46
qs_9_scaffold_15802
Species: Methanocorpusculum labreanum (50%)
2 1311 bp 50.19 5.34 100.46
qs_9_scaffold_15839
Species: Natronococcus occultus (50%)
2 1308 bp 71.18 19.34 100.46
qs_9_scaffold_19273
Species: Natronomonas moolapensis (100%)
2 1956 bp 67.84 49.08 100.46
qs_9_scaffold_11863
Species: Haladaptatus paucihalophilus (66.67%)
3 1726 bp 68.66 8.05 100.46
qs_9_scaffold_16230
Species: Halosimplex carlsbadense (50%)
2 1278 bp 74.73 27.78 100.47
qs_9_scaffold_9437
Species: Haloarcula amylolytica (50%)
2 2120 bp 69.86 7.74 100.47
qs_9_scaffold_12426
Class: Halobacteria (66.67%)
3 1651 bp 73.65 12.78 100.49
qs_9_scaffold_6661
Species: Halococcus morrhuae (50%)
2 2845 bp 65.87 76.70 100.49
qs_9_scaffold_17078
Domain: Bacteria (100%)
3 1215 bp 64.28 5.60 100.49
qs_9_scaffold_5285
Order: Halobacteriales (100%)
3 3418 bp 65.04 11.23 100.50
qs_9_scaffold_17337
Species: Natrinema altunense (50%)
2 1197 bp 50.38 6.27 100.50
qs_9_scaffold_1933
Species: Halobacterium sp. DL1 (100%)
6 6758 bp 60.52 13.67 100.50
qs_9_scaffold_13079
Species: Halosimplex carlsbadense (50%)
2 1576 bp 68.15 10.03 100.51
qs_9_scaffold_15127 3 1367 bp 56.04 6.14 100.51
qs_9_scaffold_18076
Species: Halococcus hamelinensis (66.67%)
3 1149 bp 63.36 16.80 100.52
qs_9_scaffold_13490
Species: Chroococcales cyanobacterium CENA595 (50%)
2 1531 bp 65.71 9.14 100.52
qs_9_scaffold_12156
Species: Natronomonas moolapensis (100%)
2 1686 bp 72.60 33.21 100.53
qs_9_scaffold_13819
Species: Halomicrobium mukohataei (50%)
2 1495 bp 60.47 7.16 100.54
qs_9_scaffold_6354
Species: halophilic archaeon DL31 (50%)
4 2954 bp 72.75 41.40 100.54
qs_9_scaffold_8267 3 2387 bp 58.44 6.54 100.55
qs_9_scaffold_18867
Species: Natronomonas pharaonis (50%)
2 1101 bp 71.21 24.98 100.55
qs_9_scaffold_8175
Species: Salinibacter ruber (50%)
2 3100 bp 65.13 37.84 100.55
qs_9_scaffold_16451 3 1262 bp 51.11 7.61 100.55
qs_9_scaffold_16457
Species: Halococcus saccharolyticus (50%)
2 1262 bp 67.59 49.68 100.55
qs_9_scaffold_9801
Species: Halococcus salifodinae (50%)
4 2682 bp 68.75 47.80 100.56
qs_9_scaffold_7877
Class: Halobacteria (71.43%)
7 2488 bp 63.34 10.61 100.56
qs_9_scaffold_7878
Species: Natronomonas moolapensis (50%)
4 2488 bp 69.21 42.56 100.56
qs_9_scaffold_16697
Species: Halococcus salifodinae (50%)
2 1244 bp 67.52 26.37 100.56
qs_9_scaffold_16723
Species: Natrinema gari (50%)
2 1241 bp 60.35 11.60 100.56
qs_9_scaffold_14698
Species: Rhodothermus marinus (100%)
2 1405 bp 66.26 8.68 100.57
qs_9_scaffold_16982
Domain: Bacteria (66.67%)
3 1223 bp 67.95 8.09 100.57
qs_9_scaffold_14446
Species: Natronomonas moolapensis (50%)
6 1903 bp 67.47 49.71 100.58
qs_9_scaffold_8331 3 3394 bp 53.77 5.92 100.59
qs_9_scaffold_20522
Species: Halococcus thailandensis (50%)
2 1008 bp 68.15 8.53 100.59
qs_9_scaffold_20530
Genus: Halococcus (66.67%)
3 1008 bp 68.15 21.13 100.59
qs_9_scaffold_20531
Species: Halococcus saccharolyticus (66.67%)
3 1008 bp 69.44 43.75 100.59
qs_9_scaffold_24526
Order: Halobacteriales (66.67%)
3 2848 bp 64.96 25.43 100.60
qs_9_scaffold_11366
Species: halophilic archaeon J07HX64 (100%)
3 1798 bp 72.75 22.86 100.61
Displaying items 16901-16950 of 17166 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.