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qs_9_scaffold_98_16

Organism: QS_9_Oscillatoriophycideae_48_30

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(12244..13191)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 310.0
  • Bit_score: 488
  • Evalue 8.90e-135
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 315.0
  • Bit_score: 487
  • Evalue 2.30e-135
DNA-directed RNA polymerase subunit alpha n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DNQ6_9CHRO similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 310.0
  • Bit_score: 488
  • Evalue 6.30e-135

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Taxonomy

Rubidibacter lacunae → Rubidibacter → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 948
GTGGCGCAGTTTCAAATCGAGTGTATAGAATCCAAGACTCAACAAGATCAAAGCCAATATAGCAAATTTGTCCTCGAGCCTCTCGAACGCAGTCAAGGAACTACCGTTGGAAATACCCTGAGACGGGTTTTACTGTCGAATCTGGAAGGAGCAGCAGTAACAGCGGTTCGCATTGCTGGAGTCAGTCATGAATTTGCTACGGTCAAAGGAATCCGTGAGGATGTCCTGGAAATCTTGCTGAACATGAAAGAAGTTGTAGTCAAAAGCTACTCCCCAGGACCCCACTTGGGACGTCTCGTGGCTACAGGACCAGCTCAAGTAACAGCAGGTGATTGCGATCTTCCCTCCGAAGTAGAGATGGTAGACCCTAACCAGCATATTGCTACCCTCGGCGAGGGAGCGAAGCTGGAGATGGAATTTCGCGTCGAAAAGGGAAAGGGATATCGACCGGTAGAGCGGGCGAGAGACGAAGGTAGCTCTCTAGATTTTCTGCAAATTGACGCAGCGTTCCGACCAGTTAACAAGGTCAACTACAGCGTAGAAGATGCCAGGATCGACGGCTCCCTTGCCAAAGACCGATTAATTCTAGAAATTTCCACCAACGGTAGTGTCCAACCAGAAGAAGCGCTTTCTCAAGCTGCTGGAATCGTGGTTGACTTGTTTGACCCGCTTAAAGATTTAACCCTCGAAGCGATTCAAGAGGAACCTCAACAGGAGGAAGACCCCACCGGTCAGATTCCCGTGGAAGAATTGCAACTGTCGGTGCGGGCTTATAATTGTTTGAAAAGGGCGCAGGTTAACTACGTCGCTGACTTACTCGAATATAGTTACGAAGACCTCTTGGAAATCAAAAACTTTGGTCAAAAGTCGGCAGAGGAAGTAGTGGAGGCATTGCAGCAGCGTTTGGGGATTACTCTGCCGCAGGAAAAATCGACCAGGACTAGCTAA
PROTEIN sequence
Length: 316
VAQFQIECIESKTQQDQSQYSKFVLEPLERSQGTTVGNTLRRVLLSNLEGAAVTAVRIAGVSHEFATVKGIREDVLEILLNMKEVVVKSYSPGPHLGRLVATGPAQVTAGDCDLPSEVEMVDPNQHIATLGEGAKLEMEFRVEKGKGYRPVERARDEGSSLDFLQIDAAFRPVNKVNYSVEDARIDGSLAKDRLILEISTNGSVQPEEALSQAAGIVVDLFDPLKDLTLEAIQEEPQQEEDPTGQIPVEELQLSVRAYNCLKRAQVNYVADLLEYSYEDLLEIKNFGQKSAEEVVEALQQRLGITLPQEKSTRTS*