ggKbase home page

qs_9_scaffold_13386_7

Organism: QS_9_Halococcus_68_45

partial RP 20 / 55 MC: 2 BSCG 15 / 51 MC: 1 ASCG 24 / 38 MC: 1
Location: 3421..3981

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0X1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 188.0
  • Bit_score: 348
  • Evalue 3.60e-93
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 188.0
  • Bit_score: 348
  • Evalue 5.00e-93
tfbA2; transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 200.0
  • Bit_score: 322
  • Evalue 1.00e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus thailandensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 561
ATGAGCGACACAACGACCCGGATCAACCGCGAGGAAGAGACCCGAGAGACCGAGCAACAAGAGGAGGCCCCGGAGGACGAGCTGGTCTGTCCGGAGTGTGGCGGCCGCCTGGTGAGCGACACCGAGCACGGCGAGACGGTGTGCACCGACTGCGGGCTGGTGGTCGAGGCCGACGAGATCGACCGCGGCCCCGAGTGGCGCGCGTTCGACTCCGCCGAGCGCGATCAAAAATCCCGCGTCGGGGCCCCGACGACGAACATGATGCACGACAAGGGGCTCTCGACCAACATCGGCTGGCAGGACAAAGACGCCTACGGCAACAGTCTCTCGAGCCGTCAGCGCCAGAAGATGCAGCGCCTCCGCACGTGGAACGAGCGCTTCCGCACCCGCGACTCCAAGGAGCGCAACCTCAAGCAAGCGTTGGGCGAGATCGATCGGATGGCGAGCGCGCTCGGTCTTCCCGATTCGGTGCGCGAGACCGCCTCCGTGATCTACCGCCGGGCGCTCGACGAGGACCTCCTCCCCGGGCGCTCGATCGAGGGCGTCTCCACCTCCGCGCTG
PROTEIN sequence
Length: 187
MSDTTTRINREEETRETEQQEEAPEDELVCPECGGRLVSDTEHGETVCTDCGLVVEADEIDRGPEWRAFDSAERDQKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQRQKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDSVRETASVIYRRALDEDLLPGRSIEGVSTSAL