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qs_9_scaffold_1404_6

Organism: QS_9_Halococcus_68_45

partial RP 20 / 55 MC: 2 BSCG 15 / 51 MC: 1 ASCG 24 / 38 MC: 1
Location: 4622..4843

Top 3 Functional Annotations

Value Algorithm Source
H/ACA RNA-protein complex component Gar1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N459_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 73.0
  • Bit_score: 138
  • Evalue 2.90e-30
H/ACA RNA-protein complex component Gar1 {ECO:0000313|EMBL:EMA52651.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 73.0
  • Bit_score: 138
  • Evalue 4.00e-30
gar1; tRNA/rRNA pseudouridine synthase complex protein Gar1 similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 76.0
  • Bit_score: 102
  • Evalue 3.80e-20

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 222
ATGAGACGTGCCGGCGAGGTCGTCCGGGTCGCCCAGGGGCTCGCCATCGTCCGCTGTCCCGGTGAGGCACACCCCGACATCGGGACCGAACTCACGGATCAGGAACTCTCGACTGTGGGCCGCGTGGTCGACGTGTTCGGGCCGGTCGAGCGGCCGTATCTCGCGGTCGACCCGCGATCCGAGCCGACTGGGTTGCTCGGGAGTCGGCTCTACGCCGAGTAG
PROTEIN sequence
Length: 74
MRRAGEVVRVAQGLAIVRCPGEAHPDIGTELTDQELSTVGRVVDVFGPVERPYLAVDPRSEPTGLLGSRLYAE*