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qs_9_scaffold_9286_4

Organism: QS_9_Halococcus_68_45

partial RP 20 / 55 MC: 2 BSCG 15 / 51 MC: 1 ASCG 24 / 38 MC: 1
Location: comp(2633..3184)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227456 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 181.0
  • Bit_score: 321
  • Evalue 8.40e-85
2'-5' RNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 181.0
  • Bit_score: 321
  • Evalue 6.00e-85
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 180.0
  • Bit_score: 256
  • Evalue 6.60e-66

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 552
ATGCGACTGTTCGTGAGCGTCGATCTCGACGGGCTCGCCGCGGAGGTCGCGACCGTTCAGGAAACGGTCGCCGACGCGAGCGGGGTTCGGCTCACCGATCCCGGGAACGTCCACGTGACGCTGAAGTTCCTCGGCGAGGTCGACGAAGAGCGGATTCCGGACCTCACGGGGGAGGTAGCCGACGGGATCGACGAAACGGGTGTCGGACCGTTCAGGGCCGCCTTCGGCGGGCTCGGCGCGTTCCCGAGCGAGGAGTATATCCGCGTGCTCTGGATCGGCGTCCACGAGGGTGGCGAGGAGCTGACCAGGCTCCACGAGGCGATCGAGAACCGAACGACCGAGATGGGGTTCGATCCCGCCGACCACGAGTTCACGCCGCACGCGACGATCGCCCGAATGGATCACGCCGGCGGCAAGGCGGAGGTCCAGCGCGCGCTCCGCGAGACCGATCCCACCGTCGGCACGCTCGACGTGAGCGAGGTCCGGCTGACCGAGAGCACACTCGACGACGACGGACCGGAGTACACCACCGTCGAACGGTTCGCGTTCTGA
PROTEIN sequence
Length: 184
MRLFVSVDLDGLAAEVATVQETVADASGVRLTDPGNVHVTLKFLGEVDEERIPDLTGEVADGIDETGVGPFRAAFGGLGAFPSEEYIRVLWIGVHEGGEELTRLHEAIENRTTEMGFDPADHEFTPHATIARMDHAGGKAEVQRALRETDPTVGTLDVSEVRLTESTLDDDGPEYTTVERFAF*