ggKbase home page

qs_9_scaffold_1214_22

Organism: QS_9_Halobacteriales_67_17

near complete RP 27 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 32 / 38 MC: 2
Location: 15215..16177

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMH4_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 324.0
  • Bit_score: 530
  • Evalue 8.70e-148
tfbA; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 320.0
  • Bit_score: 531
  • Evalue 1.40e-148
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 320.0
  • Bit_score: 531
  • Evalue 7.10e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haloarcula marismortui → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 963
ATGTCACGGCCGAGCCGCGAGCGCCAGCGTGAGCCGGAGACAGCCGAGGAAGTCGAGGACGAGTCCGAATCCGAGTCCGGCTGTCCCGACTGCGGTTCCGACACGCTCGTCACCACGGGCGACCACGAAACCGTCTGCGACGACTGTGGACTGGTCGTCGACGACTCGAACATCGACCGGGGGCCGGAGTGGCGCGCGTTCAATCACTCCGAACGCCAGTCGAAGTCCCGCGTCGGCGCGCCGACCACCCAGACGATGCACGACAAGGGGTTGACCACGCAGATCGACTGGAAGGACAAGGACGCCTACGGTCGGTCGATCTCCTCCGAAAAGCGGAGTCAAATGAATCGACTCCGCAAGTGGCAGGAGCGCATCCGCACCAAAGATGCTGGCGAACGCAACCTCCAGTTTGCCCTCTCGGAGATCGACCGGATGAGCTCCGCACTCGGCGTCCCACACTCGGTCCGGGAGGTCGCGTCCGTGATCTATCGCCGGGCGCTCGACGACGACCTCATCCGGGGCCGCTCCATCGAGGGCGTCGCCACCAGCGCCCTGTACGCCGCCTGCCGACAGGAGGGCATCCCTCGCTCGCTGGAGGAGATCAGCGACGTGTCGCGCGTCGAACGCAAAGAGATCGGCCGCACCTACCGGTACGTCTCACAGGAACTCGCCTTGGAGATGGAGCCGGTCGACCCGAAGAAGTACGTCCCGCGGTTCTGCTCGTCGCTCGGCGTGAGCGACGAGGTGCGCGCCAAGGCGAAGGAGATCATCGACACCACCGCCGAGCAGGGATTGCTGTCGGGAAAATCGCCGACGGGGTACGCGGCCGCGGCCATCTACGCCGCCTCCCTGCTCTGTAACGAGAAGAAGACACAGCGGGAAGTCGCCGACGTCGCGCAGGTCACCGAGGTCACCATCCGCAACCGCTATCAAGAGCAGATCGAGGCGATGGAGCTGTACTGA
PROTEIN sequence
Length: 321
MSRPSRERQREPETAEEVEDESESESGCPDCGSDTLVTTGDHETVCDDCGLVVDDSNIDRGPEWRAFNHSERQSKSRVGAPTTQTMHDKGLTTQIDWKDKDAYGRSISSEKRSQMNRLRKWQERIRTKDAGERNLQFALSEIDRMSSALGVPHSVREVASVIYRRALDDDLIRGRSIEGVATSALYAACRQEGIPRSLEEISDVSRVERKEIGRTYRYVSQELALEMEPVDPKKYVPRFCSSLGVSDEVRAKAKEIIDTTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIEAMELY*