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qs_9_scaffold_2258_8

Organism: QS_9_Halosimplex_carlsbadense_67_15

near complete RP 33 / 55 MC: 3 BSCG 29 / 51 MC: 1 ASCG 32 / 38 MC: 1
Location: comp(5797..6045)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:ELZ25451.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ25451.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 82.0
  • Bit_score: 140
  • Evalue 1.20e-30
DNA-directed RNA polymerase subunit F n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQD3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 82.0
  • Bit_score: 140
  • Evalue 8.50e-31
RNA polymerase Rpb4 similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 82.0
  • Bit_score: 135
  • Evalue 7.70e-30

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 249
ATGCGCTACGAACTCGCGCGGGCCATCGAGCACGTCAACCGCTTCGCCGTCCTCGACCCCGAGGAGTCGCTGGAGTTCGTCGACGAACTTCTCGAACTCGAGAAGGTCGACGGGCCGACCGCTTACAAGATCGCGAACCTCCGCCCGCAGGACCGCGACGAACTGCGAGCGATCTACGCACAGGAGCGGTTCACCCTCTCGGGCGACGAACTCGACGACATCCTCGCAGTCGTCGCGAAGTACACCTGA
PROTEIN sequence
Length: 83
MRYELARAIEHVNRFAVLDPEESLEFVDELLELEKVDGPTAYKIANLRPQDRDELRAIYAQERFTLSGDELDDILAVVAKYT*