ggKbase home page

qs_9_scaffold_6788_4

Organism: QS_9_Halosimplex_carlsbadense_69_15

partial RP 29 / 55 MC: 3 BSCG 26 / 51 MC: 2 ASCG 29 / 38 MC: 2
Location: comp(1842..2198)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:ELZ25451.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ25451.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 118.0
  • Bit_score: 201
  • Evalue 8.10e-49
DNA-directed RNA polymerase subunit F n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQD3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 118.0
  • Bit_score: 201
  • Evalue 5.80e-49
RNA polymerase Rpb4 similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 118.0
  • Bit_score: 190
  • Evalue 3.80e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 357
ATGACGATCTTCAAGGAGAAATTGGACGAGGAGTTCCTGACCGTCGCCGAGACCAAGGAGATCCTGGAGGAGCTCGAGCGCGAGCGCGCGGCCGACGAGGACCGCGAGATGCGCTACGAACTCGCGCGGGCGATCGAACACGTCAACCGCTTCGCCGTCCTCGACCCCGAGAAGTCCAACGAGTTCGTCGCGGAACTGCTCGAACTGGAGAAGGTCGACGAGGCGACCGCCTACAAGATCGCCGACCTCCAGCCCCGGGACCGGGACGAGTTGCGGGCCGTCTACGCCCAGGAGCGCTACTCCCTGTCGGGCGACGAACTCGACGAGATCCTCGAAGTCGTCGCCAGGTACGCCTGA
PROTEIN sequence
Length: 119
MTIFKEKLDEEFLTVAETKEILEELERERAADEDREMRYELARAIEHVNRFAVLDPEKSNEFVAELLELEKVDEATAYKIADLQPRDRDELRAVYAQERYSLSGDELDEILEVVARYA*