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QS_9_Eukaryota_52_13

QS_9_unknown_55_15
In projects: QS_9

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_9_UNK

Properties

Avg. coverage: 15.48 Longest contig: 230.46 Kbp Bin length: 11.28 Mbp GC content: 55.38 %
Contigs count: 327 Features count: 11017 rRNAs count: 2 tRNAs count: 44

Genome completeness

megabin RP 48 / 55 MC: 29 BSCG 44 / 51 MC: 24 ASCG 24 / 38 MC: 9
Displaying items 1-50 of 327 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
qs_9_scaffold_984
Phylum: Chlorophyta (66.67%)
9 10363 bp 55.85 15.05 87.28
qs_9_scaffold_9802
Species: Plasmodium vivax (50%)
2 2050 bp 68.83 10.54 93.51
qs_9_scaffold_964 13 10442 bp 53.88 15.42 82.13
qs_9_scaffold_954 10 10489 bp 55.01 14.66 69.93
qs_9_scaffold_9537
Species: Penicillium chrysogenum (100%)
1 2100 bp 57.00 5.76 96.29
qs_9_scaffold_95 99 123148 bp 56.15 14.36 82.21
qs_9_scaffold_9387 4 3042 bp 47.40 14.07 47.73
qs_9_scaffold_93 36 38086 bp 55.47 14.50 75.55
qs_9_scaffold_925 21 15808 bp 52.83 14.95 70.26
qs_9_scaffold_922 16 16218 bp 54.73 14.65 83.09
qs_9_scaffold_921 9 13718 bp 54.45 15.07 60.97
qs_9_scaffold_92 55 59543 bp 56.64 14.37 74.47
qs_9_scaffold_91 75 64595 bp 53.75 15.04 69.70
qs_9_scaffold_9054
Species: Fusarium oxysporum (50%)
2 2206 bp 70.40 9.61 100.09
qs_9_scaffold_9 102 107478 bp 56.27 14.54 76.69
qs_9_scaffold_89 37 38551 bp 55.42 14.85 74.55
qs_9_scaffold_88 98 88195 bp 55.19 14.50 76.29
qs_9_scaffold_876
Domain: Viridiplantae (60%)
10 11097 bp 55.32 14.09 68.51
qs_9_scaffold_87 114 120087 bp 55.42 14.58 78.11
qs_9_scaffold_86 74 72687 bp 61.64 13.91 88.28
qs_9_scaffold_84 54 64817 bp 55.08 15.15 73.11
qs_9_scaffold_8296
Species: Setaria italica (100%)
1 2380 bp 57.31 11.81 58.11
qs_9_scaffold_82 42 41501 bp 55.70 14.31 76.85
qs_9_scaffold_815 5 11559 bp 54.29 14.86 94.32
qs_9_scaffold_802 13 11653 bp 53.07 15.14 63.46
qs_9_scaffold_80 36 49393 bp 54.31 14.71 74.22
qs_9_scaffold_8 114 116063 bp 54.90 14.79 72.69
qs_9_scaffold_7991
Species: Scedosporium apiospermum (50%)
2 2455 bp 50.88 7.41 83.95
qs_9_scaffold_781 27 23235 bp 54.33 15.39 77.29
qs_9_scaffold_78 36 41520 bp 54.09 14.53 61.91
qs_9_scaffold_778 26 20076 bp 61.12 13.83 81.41
qs_9_scaffold_776
Domain: Viridiplantae (50%)
12 11891 bp 56.84 14.13 83.71
qs_9_scaffold_77 62 64445 bp 56.15 14.35 78.89
qs_9_scaffold_768 25 28214 bp 53.92 15.19 80.01
qs_9_scaffold_75 29 46441 bp 53.56 15.21 76.41
qs_9_scaffold_74 46 45602 bp 52.83 15.43 63.49
qs_9_scaffold_7392
Species: Scedosporium apiospermum (50%)
2 2619 bp 61.86 57.39 67.70
qs_9_scaffold_73 49 41836 bp 56.27 14.37 79.33
qs_9_scaffold_721 20 15217 bp 55.19 14.40 75.88
qs_9_scaffold_72 60 66197 bp 54.88 14.48 77.63
qs_9_scaffold_708 20 22452 bp 54.82 14.82 68.04
qs_9_scaffold_70 113 121391 bp 55.17 14.36 76.79
qs_9_scaffold_7 87 90834 bp 55.22 14.51 77.78
qs_9_scaffold_684 10 12842 bp 52.73 15.89 85.80
qs_9_scaffold_68 33 43039 bp 53.97 15.30 68.27
qs_9_scaffold_671 9 12973 bp 54.78 14.52 78.16
qs_9_scaffold_665 14 15029 bp 56.18 15.10 78.45
qs_9_scaffold_66 73 69291 bp 55.03 14.57 79.09
qs_9_scaffold_652 19 17717 bp 56.33 13.42 80.06
qs_9_scaffold_65 58 54505 bp 55.41 14.40 80.99
Displaying items 1-50 of 327 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.