ggKbase home page

rifcsphigho2_01_scaffold_62231_9

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Diapherotrites_GW2011_AR10_43_9

near complete RP 34 / 55 MC: 4 BSCG 22 / 51 MC: 2 ASCG 36 / 38 MC: 2
Location: 3918..4259

Top 3 Functional Annotations

Value Algorithm Source
transcription initiation factor TFIID TATA-box-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 226
  • Evalue 3.50e-57
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 226
  • Evalue 1.70e-56
transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5241036 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 114.0
  • Bit_score: 225
  • Evalue 2.80e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR10 → Archaea

Sequences

DNA sequence
Length: 342
GTGGCAACGGCAAACCTCAACATGACTCTTGACTTGTTCAAGACTGCAATGAACTTAGACAACGTTGAGTACGAGCCGGAACAATTCCCTGGAGCAATTTTAAGGATACACGAGCCAAAGCTGACTCTGCTGTTGTTCAAGAACGGCAAGCTTATTTGTGCTGGAGCAAAAAAAGAGGAGTTCCTGAAAAAAGGCTTAAGGAAAGCTGGAACGCTTATTAGGTCAGTCAACAAGGAAGCGAAAAAGGCAAAACCTGAAAAGCCTAAAACCCCGAAAAAACAGAAAGAAAAGCCTGCAGCAACAGGAAAAACCGCGAAAGACGACCAAAAGAAGAAAAAGTAA
PROTEIN sequence
Length: 114
VATANLNMTLDLFKTAMNLDNVEYEPEQFPGAILRIHEPKLTLLLFKNGKLICAGAKKEEFLKKGLRKAGTLIRSVNKEAKKAKPEKPKTPKKQKEKPAATGKTAKDDQKKKK*