ggKbase home page

rifcsphigho2_01_scaffold_2284_48

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_57_88

near complete RP 30 / 55 MC: 4 BSCG 6 / 51 ASCG 34 / 38 MC: 1
Location: 39707..40765

Top 3 Functional Annotations

Value Algorithm Source
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; TaxID=1579374 species="Archaea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 354.0
  • Bit_score: 333
  • Evalue 3.10e-88
Protein pelota homolog id=5800182 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 354.0
  • Bit_score: 325
  • Evalue 7.90e-86
mRNA surveillance protein Pelota similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 360.0
  • Bit_score: 241
  • Evalue 4.30e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR16 → Archaea

Sequences

DNA sequence
Length: 1059
ATGAAACAGCTCTTCGCAGACTTTAGATCGGGAGAAGTGAAGCTCGAGGTGGAGACGGCGGACGACCTCTGGCACCTCAAGGGCATCATCGAGGCAGGCGACGCCATCAGGGGCAGGACCCTGCGCAAGGTCTCTTCCGGGAACAAGGACGAGCGCGCGAAGGACGCCGTCAGGAAGCCCATGGTGCTCGCCGTCAGGGTCGAGAAGGTTGATTTCGGCGATGCCGGCGAGCTGCGGGCAGGCGGCCCCATCACCGAGGGACCGGAAGACATCCCCCTGGGAACGTACCATACCTTTGCCCTTGGGCTCCATACGCAGTTCTCCCTTGTCAAGCAGCACTGGCTCAAGTTCCAGAGGGACAGGCTGCAGCAGGCCCTGCAGTCATCGAAGACCTCTGTCCTCCTCGTGGTCATGGACAGGGAAGAGGCGTACTTCGCGCTGCTCAAGAGCTTCGGCTACGAGCTGCTCCTCCGCCTCAAGGGCAATGTCCAGAAGAAGGGAGACACCGCCTCCGCCGCCGGCAACTTCTACGCGGACATCGCGAAGCAGCTCGGGGAGTACAACAGCCGCCACCAGCTGCGGAGCATCGTCATCGCCTCCCCCGCCTTCTGGAAGGAAGACCTGATGGGGCTTGTGGAGGACGGGAATCTCAGGAAAAAGATCGTCCTCGCCACCTGCTCCTCCGTCGGGGAGAACGGCATCGCCGAGGTCCTCAAGAGGCCGGAGGTGAAGGAAGCGCTGAAGCAGGAGCGCTCCTCGCAGGAGGCGCAGGCCGTTGAAGAATTGCTCACGGAAATCTCCAAGCAGGGCACGGCCGCGTATGGCAGGCAGGAGACGCAGAAGGCGTGCGGCATGGGCGCCATCCGGCTGCTCCTGGTAACGGACGCCGCGCTGCAGGCATCCCGCCGTGAAGGATGGTACCCGGAGCTCGAGCAGCTGATGAAGGACGCCGAAGCCGCGAAAGGGGATGTCATGATCGTCTCCACCGGGCACGACGCCGGCAGGCAGCTCCAGGGCATCGGCGGCATAGGGGCATTATTGAGATTTAGGATGCAGTAT
PROTEIN sequence
Length: 353
MKQLFADFRSGEVKLEVETADDLWHLKGIIEAGDAIRGRTLRKVSSGNKDERAKDAVRKPMVLAVRVEKVDFGDAGELRAGGPITEGPEDIPLGTYHTFALGLHTQFSLVKQHWLKFQRDRLQQALQSSKTSVLLVVMDREEAYFALLKSFGYELLLRLKGNVQKKGDTASAAGNFYADIAKQLGEYNSRHQLRSIVIASPAFWKEDLMGLVEDGNLRKKIVLATCSSVGENGIAEVLKRPEVKEALKQERSSQEAQAVEELLTEISKQGTAAYGRQETQKACGMGAIRLLLVTDAALQASRREGWYPELEQLMKDAEAAKGDVMIVSTGHDAGRQLQGIGGIGALLRFRMQY