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rifcsphigho2_01_scaffold_1858_16

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_33_11

near complete RP 37 / 55 MC: 5 BSCG 5 / 51 ASCG 32 / 38 MC: 3
Location: 23429..24544

Top 3 Functional Annotations

Value Algorithm Source
truD; tRNA pseudouridine synthase D (EC:5.4.99.12); K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=CG_Woesearch_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 357.0
  • Bit_score: 259
  • Evalue 7.90e-66
Probable tRNA pseudouridine synthase D id=5799863 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 40.1
  • Coverage: 349.0
  • Bit_score: 251
  • Evalue 1.20e-63
tRNA pseudouridine synthase D TruD similarity KEGG
DB: KEGG
  • Identity: 30.1
  • Coverage: 409.0
  • Bit_score: 158
  • Evalue 5.00e-36

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Taxonomy

CG_Woesearch_01 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 1116
ATGAAACTACAGGATATAACAGAGACATTTAAAGAAGAGCCTAACTACAAAATCAAATCAATCCCAGAGGATTTTATAGTTAAAGAAATCAGCCTAGAAGATTATTCTAAATCGCAAACAAAACAGGGTAAATTTATTTACTGTTTATTAAAAAAGAAAAATTATAATACTATAGATGCAATTAAACAAATAGCTAGTATTTTTAACCTTAAAGAAAAACAGGTTGGTTTTGCTGGTAATAAAGATAAGAATGCTATAACTGAACAGGTCATCTCTCTGCCTGAGATTAATTTAGATAGGTTGAATAAAGTTCAAATAAGAGATATAGAGTTAAAATTCTTAGCTCGAGGGAATGAATCGATAACTCTCGGCCATCTAAAAGGCAACGAGTTTATCATTACGATCAGAAATTTAGATCTGAATGATATTAAATACTTAGGGAAAAAAATAGAATATCAGTACTCAAATGATAAAAAATTATACACTCCAAATTATTTTGACGACCAGCGCTTTGGACGCAAAAACCATGAAATTGGACGACACATAGTCAAAAAAGAATTCAAAGAAGCCGTTGCAAAACTTGATAACCCCCTATGTTCTTCTTATTTAGAAGAGAAAAAAACCGATTATGTCGGGGCTTTAAAGCGTCTGCCTCTACGCCTATTACGTATGTATGTTAACGCTTATCAAAGTTGGTTATGGAATGAAACTTTATCTTTATATCTAAAAAAGAAAACCGAGCAATTTGTAGAAGTAAAATATGCTGCTGGATACTTAGTATTTCCAGATGAGGCCATACCAGATTTAGAAATACCTCTATTGGGCTTTGAAGATTTACCAAAATTAGATAAAGATTTAACAGAAATACTGGAAATACTTAAGAAAAGAGAAAACCTCTCTCCTCAAGATTTTATAATTAAACAAATACCTGAACTATCAGCTGAAGGAGAACTGAGAAAAGCTTTTGTTGAAGTGAAAGATTTTAAAATTAGAAACACGGAGAAAGATGATCTTAACCAAGAGAAGAATAAAGTAACAATAAGCTTTTTTCTTCAAAAAGGCAGTTATGCCACCATCGTAATTAAAAAAATATTTTCAGAAGAAAAAATGATATAA
PROTEIN sequence
Length: 372
MKLQDITETFKEEPNYKIKSIPEDFIVKEISLEDYSKSQTKQGKFIYCLLKKKNYNTIDAIKQIASIFNLKEKQVGFAGNKDKNAITEQVISLPEINLDRLNKVQIRDIELKFLARGNESITLGHLKGNEFIITIRNLDLNDIKYLGKKIEYQYSNDKKLYTPNYFDDQRFGRKNHEIGRHIVKKEFKEAVAKLDNPLCSSYLEEKKTDYVGALKRLPLRLLRMYVNAYQSWLWNETLSLYLKKKTEQFVEVKYAAGYLVFPDEAIPDLEIPLLGFEDLPKLDKDLTEILEILKKRENLSPQDFIIKQIPELSAEGELRKAFVEVKDFKIRNTEKDDLNQEKNKVTISFFLQKGSYATIVIKKIFSEEKMI*