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rifcsphigho2_01_scaffold_8509_2

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_33_11

near complete RP 37 / 55 MC: 5 BSCG 5 / 51 ASCG 32 / 38 MC: 3
Location: comp(917..1624)

Top 3 Functional Annotations

Value Algorithm Source
sigma-54-interacting response regulator Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 232.0
  • Bit_score: 240
  • Evalue 3.10e-60
Helix-turn-helix, Fis-type id=5043985 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 228.0
  • Bit_score: 147
  • Evalue 1.50e-32

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGGGAGAAAATAACTACCACGAAAAAAAGAAAGATTTGGAAGAAACATTAAAAGAAAAAGTTAGCCCTTTGCTAGAAGAATCTATGAGCCGCAATTGGGGCATAACCATTCCAAAAATAGAATCAGATATTACGGACAAACTAAAGAACCCACAAAGTATGCAGATTTATATCCCATCTAATCTATCATTTTCAACAGCTAAAAAAAGATTCAAAAAAGAATTTCTTAAAAAAGAGTTACGGTTTCATTTAGGAAATATTTCTCAATTAGCTCGTTCTTTAAAGATAAATCGCCGCAGCATCCATAGAGTAATTAACTCATTAGATATCGGCCTAGAAGATATCCATAATAAAAGTGAGACCTATAACAAAGATAAAAATTCAAAGATAGAAGAAACAGTTCATGAAAAAGAAATAAAAAAAGGAGTAGACAAAACTATCCGCAGCACATTAGAAAATTATAAAAATATAATTCAGCCACAAAAAATGGAAAAAATGTACGCAGACATCCCAGGATTATCCAGAAATATAGCTAAATTTTTGCCTCATCAAGAAATAACATGGAAAGAAGCAGAAAGAGATTTTGAAAGACAATTTTTGAGTAAAACTCTTATAGACAATAAAGGCGAGATAAATAAAACTGCTAAAAGATTAAAAATTAGAGTAGAAACATTATATAGAAAAATTAAGAGATATGGATTAAAATGA
PROTEIN sequence
Length: 236
MGENNYHEKKKDLEETLKEKVSPLLEESMSRNWGITIPKIESDITDKLKNPQSMQIYIPSNLSFSTAKKRFKKEFLKKELRFHLGNISQLARSLKINRRSIHRVINSLDIGLEDIHNKSETYNKDKNSKIEETVHEKEIKKGVDKTIRSTLENYKNIIQPQKMEKMYADIPGLSRNIAKFLPHQEITWKEAERDFERQFLSKTLIDNKGEINKTAKRLKIRVETLYRKIKRYGLK*