ggKbase home page

rifcsphigho2_01_scaffold_8001_16

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_38_8

partial RP 34 / 55 MC: 6 BSCG 7 / 51 ASCG 29 / 38 MC: 3
Location: comp(15693..16346)

Top 3 Functional Annotations

Value Algorithm Source
radical SAM protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 211.0
  • Bit_score: 173
  • Evalue 4.40e-40
Radical SAM domain protein id=3907430 bin=GWC2_Clostridiales_40_7 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWC2_Clostridiales_40_7 organism_group=Firmicute similarity UNIREF
DB: UNIREF100
  • Identity: 32.9
  • Coverage: 210.0
  • Bit_score: 111
  • Evalue 1.10e-21
radical SAM domain protein similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 210.0
  • Bit_score: 97
  • Evalue 4.70e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB1_FULL_RIF_OD1_06_37_44_curated → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGACCTTGGAGATTGTAAAGGCATTAAAGCCGAAATCAACATTAGTTTCCATTGTTACAAATGCTTCTTTGATTGATGAAGAGAAGATAAAAAAACTGAAAGAGGCAGGCTTAAGCTATTTGCAGATAAGCCTTGACAGCATTGATGCAAAGAAACATGATGGCTTGAGGAAAATTCCTGGATTATATAACAAGGTTATAAGGGCTGTTGAATTATGCAAGAAGTATGGGATAAGCTGCTGTTTCAGCTCAGTTGTCTACCATGGTGGAATTGATGATTTTGAAGATATTGTTAGGCTTGCCAGGAAATATGACATAATGGTCCTTATGAATTATATTGGGGTAGTTGGCGGCTGGAAAACAGAGGAAGAGCTTGCTTTGACAAAGGATGATTTTGTAAGAATACACAATCTTATGAAAGACCTGAATGTAAGGTTCCATACCATGTATAATTTCTCAGGCAAGCTGGAATGCCCTGCTGGAAGGGAAAAGATATACATAACTGCTTATGGCGATGTAATGCCCTGCAACAAGAACCAGCTGAAATCCTATGGCAATGTGCTTGAAAAGCCTTTGAAAAACATATGGATGAAGATGTTTTACAATCAAGAGTTTACCACATACTGCAAGGACTGCAAAAGATTTAACATCTAA
PROTEIN sequence
Length: 218
MTLEIVKALKPKSTLVSIVTNASLIDEEKIKKLKEAGLSYLQISLDSIDAKKHDGLRKIPGLYNKVIRAVELCKKYGISCCFSSVVYHGGIDDFEDIVRLARKYDIMVLMNYIGVVGGWKTEEELALTKDDFVRIHNLMKDLNVRFHTMYNFSGKLECPAGREKIYITAYGDVMPCNKNQLKSYGNVLEKPLKNIWMKMFYNQEFTTYCKDCKRFNI*