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rifcsphigho2_01_scaffold_28755_10

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_38_8

partial RP 34 / 55 MC: 6 BSCG 7 / 51 ASCG 29 / 38 MC: 3
Location: comp(4206..5015)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Fusobacterium sp. oral taxon 370 str. F0437 RepID=G6C689_9FUSO similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 254.0
  • Bit_score: 145
  • Evalue 6.60e-32
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=469599 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium periodonticu similarity UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 254.0
  • Bit_score: 145
  • Evalue 9.20e-32
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 254.0
  • Bit_score: 144
  • Evalue 5.40e-32

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Taxonomy

Fusobacterium periodonticum → Fusobacterium → Fusobacteriales → Fusobacteriia → Fusobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGGAATTAAGCACTCTCTTGTCTTGCGCATTAAAACATATTATATTGCCAGAAGACGAAATCAGGGATCTTATAGCAAGGGCTCAGAACAATGATGTCAATGCCAAAAACAAGATCATAGAATCAAACATAAAGGTCATAGTAAAGATTGCGAAAAAGCATGCAAAAAATGGAAACATCGAGGACCTTGTCAGCGAAGGGGTTATCGGGGCTACAAGGGCAATATACAAGTTTGAATTGTCTCGCACGACTAAGTTCATAACTTATGCGGACTATTGGATAGAGCAGGAAATTAAAAGGTATGCAAGAGGCGATGAAACAGTAAGGGCCAAGCCACACAGGTACGAAGCTATTGACAGAATAGACAAGATTATAGCAAGGTATTTTGCCAAGAATGGAAAAGATCCATCGCCAAAGTACATAGCTTACATTCTTAGAAGAAAAACAGGAAAGAAGAAATACGATGAAGCTTATGTTGAAAGAGCCCTGAAATACAGGTTCCAAGTTTTTTATATAGAAGATCATTTAGCCCTGGACAAGAACAAGGAATTACCAGATGAATCATCAGATTCTCCTGAAGATTTGGTTGTGAGGTCAAATTTGAACAATGTTATGTATGGTGCCATGCAAAAACTAAATTTGTCTGAACTGGATGTTTTATTGAAGAGGTATGGCTTGTTTGGTTTCGAGCCAAGAACATTTGAAGCAATAGGAAACGAAAGGCATAGGACAAGGGAAAGGATGAGGCAGATAGAAGTAAAGGCACTATCTAAGCTCAGGGCTGCGATGAAAAAAATACCCCCTGGCTAA
PROTEIN sequence
Length: 270
MELSTLLSCALKHIILPEDEIRDLIARAQNNDVNAKNKIIESNIKVIVKIAKKHAKNGNIEDLVSEGVIGATRAIYKFELSRTTKFITYADYWIEQEIKRYARGDETVRAKPHRYEAIDRIDKIIARYFAKNGKDPSPKYIAYILRRKTGKKKYDEAYVERALKYRFQVFYIEDHLALDKNKELPDESSDSPEDLVVRSNLNNVMYGAMQKLNLSELDVLLKRYGLFGFEPRTFEAIGNERHRTRERMRQIEVKALSKLRAAMKKIPPG*