ggKbase home page

rifcsphigho2_01_scaffold_125435_7

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_49_8

partial RP 35 / 55 MC: 6 BSCG 4 / 51 ASCG 28 / 38 MC: 3
Location: comp(3815..4189)

Top 3 Functional Annotations

Value Algorithm Source
Replication factor A1 {ECO:0000313|EMBL:KHO50628.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 135.0
  • Bit_score: 143
  • Evalue 2.80e-31
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 130.0
  • Bit_score: 128
  • Evalue 5.00e-27
replication factor A1 similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 96.0
  • Bit_score: 94
  • Evalue 2.30e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR16 → Archaea

Sequences

DNA sequence
Length: 375
ATGAAAACAAACGAAGTGCAGCCAAACCAGGGCAAGATAGACATCGTGCTTGAAATAACAAGCAAGGAAGAGCCGAGAACTTTCCAAAAATTCGGCAGGGAAGGCAAGGTGGCCAATGCCATGGGAAAGGATGATGCCGGTGAAATCAAGCTGACCCTCTGGAATGAGCAGGTCGATATGGTCGATCAGGGAGATAAAATCCAGATTATCAACGGCTGGTGCAGCGAATGGCAGGGAGAAAAACAACTAAGCACCGGCAGGTTCGGGAAATTGGAGATTCTTGAAAAAGGCACTGGCTCCCAGAAGAAAGCCGAGGAGCCTGAACCGTCTGAAGATTCTGAAGATGTTGATGTGGACGAGGAAGAAGTTCAGTAG
PROTEIN sequence
Length: 125
MKTNEVQPNQGKIDIVLEITSKEEPRTFQKFGREGKVANAMGKDDAGEIKLTLWNEQVDMVDQGDKIQIINGWCSEWQGEKQLSTGRFGKLEILEKGTGSQKKAEEPEPSEDSEDVDVDEEEVQ*