ggKbase home page

rifcsphigho2_01_scaffold_20418_5

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Diapherotrites_AR10_44_11

partial RP 30 / 55 MC: 5 BSCG 17 / 51 MC: 1 ASCG 26 / 38 MC: 2
Location: comp(3745..4557)

Top 3 Functional Annotations

Value Algorithm Source
taurine ABC transport system permease; K02050 NitT/TauT family transport system permease protein Tax=GWF2_Bacteroidetes_35_48_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 242.0
  • Bit_score: 267
  • Evalue 2.80e-68
Binding-protein-dependent transport systems inner membrane component id=4958412 bin=GWA2_Elusi_like_61_42 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 252.0
  • Bit_score: 250
  • Evalue 1.50e-63
ABC-type permease similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 217.0
  • Bit_score: 220
  • Evalue 6.00e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_Bacteroidetes_35_48_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 813
ATGCATAAAATATTCAAAACGAAGATTTTCAATAGCCTGACCTTTACCAAAAAGTTATTTATATTTGCAGTTCTTTTAGCGATCTGGCAATTTTTGGGAATGTCCGGCTACATCAGAACAGAGCTTCTTCCAATGCCCACTGACGTGTTAGCCGCATTCATCCAGATGGCATCCTCAGGGGTTTTGTTAGTGGATTCAATTGCCAGCATAAAAAGGGTTCTGATTGGCTTTGTTATCGCCTCCTTTTTCGGAATTGTCGCAGGTATGCTGCTCGCATCGTTTAATAGGGCGGCCAATTACTTGACGCCTCTGATTGAACTGCTTAGGCCAATCCCCCCGATTGCATGGATTCCAATTGCTATTTTATGGTTCGGGATTGGAGACAACCCCGCATTTTTCTTAGTCGCGTTAGGGGCATTTTTCCCGGTATTTTCCAACACTTATGAAGGAGTAAAGAACATCCAGAAAACCCACATTCATGCAGCAAAATCACTCAGGGCAAATAGAATGATGATGCTCTTCGATGTTTTGCTGCCTGCTGCCTTGCCCTCAATCTTAATCGGGCTGCATATTGGTCTGGGATTTGCCTGGATGGTTGTCATTACTGCTGAAATGGTAGGGGCCGCCTCCGGTTTGGGCTATATGATTCAATTGAACAGGATAATGCTTCAGACGCAATTTGTCATAGTCGGGATGATTGTTATTGGATTAATCGGATTCCTGATGCTTAAAGGAATGAAAATATTCGAAACTTTTATTATCCCCTGGAAAAGAATGCAAATAGCGCAAACAATGCAGGAGGTCCAAAGATGA
PROTEIN sequence
Length: 271
MHKIFKTKIFNSLTFTKKLFIFAVLLAIWQFLGMSGYIRTELLPMPTDVLAAFIQMASSGVLLVDSIASIKRVLIGFVIASFFGIVAGMLLASFNRAANYLTPLIELLRPIPPIAWIPIAILWFGIGDNPAFFLVALGAFFPVFSNTYEGVKNIQKTHIHAAKSLRANRMMMLFDVLLPAALPSILIGLHIGLGFAWMVVITAEMVGAASGLGYMIQLNRIMLQTQFVIVGMIVIGLIGFLMLKGMKIFETFIIPWKRMQIAQTMQEVQR*