ggKbase home page

RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_48_23

RIFCSPHIGHO2_01_FULL_unknown_48_23
In projects: RIFCSPHIGHO2_01_FULL  |  archaea-rifleo2  |  rifle_organic_carbon  |  cpr-dpann-all  |  DPANN

Consensus taxonomy:

Taxonomy override: Woesearchaeota

Displaying items 51-68 of 68 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
rifcsphigho2_01_scaffold_29688 7 7407 bp 48.55 21.79 92.39
rifcsphigho2_01_scaffold_12975
Species: AR9 (63.64%)
11 12292 bp 46.84 21.67 98.55
rifcsphigho2_01_scaffold_11706 26 20849 bp 47.13 21.63 94.51
rifcsphigho2_01_scaffold_112040 15 11804 bp 48.75 21.58 92.23
rifcsphigho2_01_scaffold_3754 30 27245 bp 48.49 21.29 94.74
rifcsphigho2_01_scaffold_60135
Domain: Archaea (57.14%)
7 5344 bp 47.01 21.25 94.09
rifcsphigho2_01_scaffold_13311
Domain: Archaea (71.43%)
14 12610 bp 47.99 21.16 83.01
rifcsphigho2_01_scaffold_26469 11 7966 bp 47.05 21.15 88.50
rifcsphigho2_01_scaffold_21366
Domain: Archaea (50%)
14 11299 bp 47.46 20.69 89.37
rifcsphigho2_01_scaffold_20148 13 9443 bp 47.95 20.68 89.30
rifcsphigho2_01_scaffold_26879 13 9958 bp 46.98 20.61 92.49
rifcsphigho2_01_scaffold_36733 7 6451 bp 44.81 20.43 93.89
rifcsphigho2_01_scaffold_23410
Phylum: Parcubacteria (50%)
8 9672 bp 49.20 20.28 87.62
rifcsphigho2_01_scaffold_12237 11 12731 bp 47.65 20.27 94.97
rifcsphigho2_01_scaffold_99853
Domain: Bacteria (50%)
12 8347 bp 47.61 19.61 82.34
rifcsphigho2_01_scaffold_46392
Domain: Archaea (57.14%)
7 6382 bp 46.85 19.59 98.10
rifcsphigho2_01_scaffold_46478
Domain: Archaea (50%)
8 7603 bp 49.95 19.42 89.29
rifcsphigho2_01_scaffold_31041
Phylum: DPANN (56.25%)
16 10115 bp 45.43 18.42 89.18
Displaying items 51-68 of 68 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.