ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_24

Organism: Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(20571..21254)

Top 3 Functional Annotations

Value Algorithm Source
putative macrolide efflux ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 227.0
  • Bit_score: 445
  • Evalue 3.60e-122
Macrolide export ATP-binding/permease protein MacB id=3736880 bin=GWC2_OD1_43_27 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 224.0
  • Bit_score: 306
  • Evalue 2.50e-80
putative macrolide efflux ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 222.0
  • Bit_score: 249
  • Evalue 1.00e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGTTTCTTATTGAAGTCAAAGACTTAGAAAAAACTTACTACGACGGCCAAACCGCCACACCCGCTCTGCGTGATATTTCTTTTACCATTAACCAAGGCGAATTCGCGGCTATTATGGGCCCTTCCGGCTCCGGTAAATCAACCTTGCTTCATATTCTTGGATTTTTGGATAAACAGACAGCCGGGGATTATTTTTTTAACGGAAAAACGATGAATGATTATTCAAAAAAAGAAATCGCCCAGGTGAGAAATAAAAAAATGGGCTTTGTTTTTCAGGCCTTTAATTTATTAGCCAGAACAAGCGTTTTAGAAAATGTCAGACTGCCGCTTATTTATTCTGAAATTAAGGAATCTTTCTGGGATAATCTAACTTTAAAAGCCATTGAAGCGGTCGGGCTTTCTCATCGCCTCAACCATCTTTCTTCCCAGCTTTCCGGCGGCGAAAAACAGCGCGTGGCCATTGCTCGCGCTTTGGTTAATAATCCCCAAGTTATTTTCGCCGACGAACCAACTGGCAATCTGGATTCTAAGTCCGGAAAAGCAATAATGGAGACTTTAAGACAGCTCAACTTGAAAGGCCAGACCATTATTTTAATCACCCACGAGAAAGAAATAGCCGATTATACCCAAAGGATTATTTTTTTTCGCGACGGCAGGATAGAAAGAGATAGTGGAGCTGCTTAG
PROTEIN sequence
Length: 228
MFLIEVKDLEKTYYDGQTATPALRDISFTINQGEFAAIMGPSGSGKSTLLHILGFLDKQTAGDYFFNGKTMNDYSKKEIAQVRNKKMGFVFQAFNLLARTSVLENVRLPLIYSEIKESFWDNLTLKAIEAVGLSHRLNHLSSQLSGGEKQRVAIARALVNNPQVIFADEPTGNLDSKSGKAIMETLRQLNLKGQTIILITHEKEIADYTQRIIFFRDGRIERDSGAA*