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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_3504_28

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100

near complete RP 37 / 55 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 24681..25640

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 320.0
  • Bit_score: 632
  • Evalue 3.90e-178
id=5227396 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 314.0
  • Bit_score: 433
  • Evalue 2.50e-118
conjugal transfer protein TraC similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 292.0
  • Bit_score: 305
  • Evalue 2.20e-80

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGTTTGGATTCGGAAAAAATAAAAAAAGTGAGAATATTACGGTGGCGGAAATGCCTTCGTTGCTTCCTGAAAACATCAAGGGGACGGGCGGATTTGATGTTGAAGACGCAGTGGCGCCCGCGGCCCTTCTGATAGAGTCTAACTACGTGAAGCTGGGAGAGAAAGTTGCGCGGACTCTTTTCGTTTTTACATATCCTAGATTTCTCGCGATAAATTGGTTCGCGCCCGTGATAAATTTAGATAAAGTTTTTGATATTTCAATTTTTATACACCCGCAGGATACAAATACGGTCCTGCGCCAACTCGAGAAAAAAGTCGCGGAAGTCCAATCGCAAATCCATGATCGCGAGAAAAAAGGTTTGGTGCGAGACCCGATGCTTGATACGGCGCATCATGACCTCGAGGAGTTGAGAGATAATCTTCAGCAGGCCCAGGAGAGATTATTTTCTTTTGGTTTATATATTACGATTTACGCGGAAAATCTGGCAGAGTTAAATAAAAACGAAAGTGAAATACGATCCATATTAGAGTCTAAGCTCGTCTACGCAAAACCCGCGCTTTTCCAGCAAGGGGAAGGGCTGCAGACAACCTTTCCGCTCGCAACTGATCAGCTTGAGATAAATACTAAATTGAATTCCTCCCCGATTTCTTCACTTTTTCCATTTACCTCTTTCGACCTGACTTCAAATAAAGGGATACTTTACGGAATAAACCGGCATAACTCAAGCTTGGTTCTTTTTGACCGCTTTAGTTTGGAAAACTATAACTCCGTGGTATTTGCTAAATCCGGGTCCGGAAAATCCTACGCCACTAAACTGGAAATCCTGCGCTCCATGATGCTCGGCACGGAGGTAATCGTTATCGACCCGGAACGCGAATACGAATATCTAGCGGAGACGGTGGATGGAAGATATTTCAATATATCTCTCTCTTCGCATCACCATATAAACCCATTTGAC
PROTEIN sequence
Length: 320
MFGFGKNKKSENITVAEMPSLLPENIKGTGGFDVEDAVAPAALLIESNYVKLGEKVARTLFVFTYPRFLAINWFAPVINLDKVFDISIFIHPQDTNTVLRQLEKKVAEVQSQIHDREKKGLVRDPMLDTAHHDLEELRDNLQQAQERLFSFGLYITIYAENLAELNKNESEIRSILESKLVYAKPALFQQGEGLQTTFPLATDQLEINTKLNSSPISSLFPFTSFDLTSNKGILYGINRHNSSLVLFDRFSLENYNSVVFAKSGSGKSYATKLEILRSMMLGTEVIVIDPEREYEYLAETVDGRYFNISLSSHHHINPFD