ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_35034_7

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100

near complete RP 37 / 55 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(5433..5879)

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease H Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 295
  • Evalue 4.00e-77
Ribonuclease H id=3345199 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 138.0
  • Bit_score: 187
  • Evalue 8.40e-45
ribonuclease H similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 137.0
  • Bit_score: 122
  • Evalue 9.30e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGAAGAATCCAGAAAAACTAATAGTTTATACGGACGGCGGGGCGCGGGGGAATCCGGGACCTGCGGCTTTGGGCGTCGTGATTCAGGATGCCAAGGGAAACATCATAAAAAAATTTGGAGAGCGGCTCGGGATTAAAACTAATAACGAAGCTGAATACAGCGCGATTATTGCGGCTTTACGGAAAATAAAAGCGCTTTACGGGAAAGAGAAAACCAAAAAAATGTTGATTGATATGAGAATGGATTCCGAATTGGCGGAAAAACAGCTGAATGGCATCTATAAAATCGAAGAGGAAAGATTATTCCCGCTTTTTATCAAAGTGTGGAATTTAAAAATGGATTTTGGGAAAATCACCTTCTCGCACATCCCGCGCGCGCAAAATAAGAACGCCGATCAGATGGTAAATGAGGCGCTTGACGGCGATGGCGTCGCAACTCTTTTTTAA
PROTEIN sequence
Length: 149
MKNPEKLIVYTDGGARGNPGPAALGVVIQDAKGNIIKKFGERLGIKTNNEAEYSAIIAALRKIKALYGKEKTKKMLIDMRMDSELAEKQLNGIYKIEEERLFPLFIKVWNLKMDFGKITFSHIPRAQNKNADQMVNEALDGDGVATLF*