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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_19236_9

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100

near complete RP 37 / 55 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(6752..10420)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2395
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 999.99
  • Bit_score: 1161
  • Evalue 0.0
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037A4755 similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 999.99
  • Bit_score: 1455
  • Evalue 0.0

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3669
ATGGAAACAAAAGTAACAGATTTTAAATCAATTTCAATCAGGCTCGCGTCTCCCGAGAAAATTTTGGCTTGGTCCAGAGGAGAGGTTACGAAACCCGAGACAATAAATTACAGGACGCAGAGAGCCGAGAAAGACGGGCTTTTTGACGAGCGCATTTTTGGCCCGGAAAAAGATTACGAGTGCTATTGCGGAAAATATCGCAGGATCAGGTACAAGGGAATAATTTGCGACAAGTGCGGAGTTGAAGTAACACGCTCAATCGTGCGCCGGGAGCGTATGGGGCACATAAGGCTTGCTTCGCCCGTATCGCACATATGGTTTATGCGGGGAGTCCCGTCTCGCGTTGGGCTGGTTTTGAACCTATCGATTCCAGAATTGGAGAGAGTGATATATTTCGCCGGCTACATTATTACTAAAGTTAATGATAAAGCTAAAGAGGAATCACACAGGGAGCTTGAGAAAGAATTCAAATCTAAAGCAAAAAAAGAAGGGATGAAGGAGAAAGACAAGTCTAGCCTAAAAGAAGCATGGGATGCCGCCAAAAAAGAAATCGACAGTGTCCGCATTAGAAGAGTTTTGTCTGAAGTGGAGTATCATAGGCTCTCTTTGCGCTGGGGCGAGGTTTTTGAAGCGGGCATCGGGGCGGAAGCTCTATTTAAACTTTGCAAAGATGTAAACATGTCGAGTCTTAGGAAGGAGCTTGAAAAAGAACTAGAGGAAACGGAAAATCCGTTGGCGAGGAAAAAAGTTATCAAGAGACTCTCGCTCGTCAAAGCGATGGAAAGGTCCGGAACTCGTCCAGAGTGGATGTTTTTAAATATTATTCCAGTTTCTCCTCCAGCGCTTCGCCCTATGGTTCAGCTCGAAGGAGGAAGGCACGCAACATCCGATGTAAACGACCTTTACCGAAGAGTAATAAATCGGAATAATCGTTTGAAAAAACTTTTGGAGCTAAAAGCCCCTGAAGTGATTGTTCGAAACGAAAAAAGGATGCTCCAGGAAGCTGTTGATGCGCTTTTGGATAATTCAATAAGGCGCGGGCCTGGTGCCGCAACATCGCAGGCGCAAAAACGCCCTCTGCGCTCGCTTGCGGACATGCTTAAAGGAAAGCAGGGCAGATTCCGCCAAAATCTTTTGGGGAAGCGCGTGGATTATTCAGGGCGTTCTGTTATTGTTGTCGGACCAGATCTTAAGCTACATCAATGCGGGCTTCCGAAGCATATGGCATTGGAACTTTTTCGCCCGTTCGTAATTAATAAGCTTATAACCGCTGGCCTCGCGCATAATATACGATCTGCCAACAGATTGATTGACGATGTGACTTCAGATGTATGGGCGATATTGGAAGATGTGATTCGAGGGAAATATGTTTTATTGAACCGCGCGCCGACTTTGCACCGCCTAGGAATTCAGGCTTTCCAGCCGATTTTGATTGAGGGAAACGCGATCCAAATCCACCCGATGGTTTGTTCCGCTTTCAACGCCGACTTTGACGGAGACCAAATGGCGGTCCACGTCCCGCTTACTGAAGAAGCTCAGCGGGAAGCGGCGGATATTATGGCGGCGACCAAGAATCTTCTAAAACCTGGAACCGCCGATCCGACAGTCACACCTTCGCAGGATATGGTTATCGGATGCTATTGGCTCACAAAATTAAGATCCGACGTAAAGGGAGAAGGAAAAATATTTTCGAATCCCAATGAAGCGGTTTTAGCTTATGATTACGAAATTTTGGACCTGAAAGCTAAAATAAAAGTTCGCGCAACAATGACTCCGAAGTATAAGAAATATGAGGGCGGAATTTTTGAGACGTCCGTCGGCAGGCTTTTATTCAATTCCGTCTTGCCGAACGATTTCGAATACATGAATGAAGATATTAAAAAGAAAATCTTGGAAAGAATTGTCGCTAAATTAATCGTTGATTACGGAGTCGATAAAGTGCCACCAATTTTGGACAAAATAAAATCTTTCGGATTTAAGTACGCGACTGTGTCTGGGATTTCTTGGGGAATGGACGATCTGAAAGTGCCAGAACAAAAAAGCGCGATATTAAAAGAAGCGCAAATAGAGGCAAAGAAAGTAGACGAACAATATAACGACGGATTGCTTACCGACGAAGAGAGATACGATAAAGTCATCTCGATTTGGGCGGAGGTCAAAAGAAAAGTTGATGAAATTGTTCCGACAGTTTTGAATGAAGAGGGGCCTATACATCTAATGGTTTCTTCCGCCGCACGTGGAACTTGGACACAGGTGACGCAAATGACTGGAATGAAGGGACTTGTTCGAAACCCGGCTGGCCGCACAATAGAGCTCCCGATCCTATCTTCGTACAAGGAAGGCCTTAACGTTTTGGAATATTTTATCTCGACACACGGCGCCAGAAAAGGAACGGCGGATACCGCGCTTAAGACCGCGCATGCCGGATATCTTACGCGCCGCCTTGTCGATGTCGCGCAGGAACTGATTATTCGAGAAGAGGATTGCAAAGATACGACCGGCCTCAAGATAATCCGAAAAAATATTGAGGAGTACGGAAAATCTTTTAACGCAAGGATTTTCGGACGAGTTTTGGCGCAGGACGCGAAGTGGGCGGATCAAAAACTGATTTTCAAAAAAGGGCATCTTATATCGCATGAAGATGCGGATTTATTAGATAAATCAGGAATTGAAATTGTAACGCTTCGTTCTCCGATTTCTTGCCAGACCTTACGCGGACTTTGCCAAACATGCTACGGGTACGATCTAGGTTCGAACGCTACGGTTAAAATGGGAGAAGCGGTTGGTATTGTCGCCGCGCAGGCGATAGGCGAGCCGGGCACGCAGCTTACTATGCGGACTTTCCATGTCGGAGGAGTTGCCGGAGCCTCGGACATAACAATGGGTTTGCCGAGGATTGAAGAAATTTTCGAACTGCGTCTACCAAAGAATGCTGCGGTTCTTTCGGATGTTGACGGGACGGTTATCGAAATAGGGGATAGTGGCAGGGAAAAAGTGGTTAAAATTTTGGTTAGCGAAAAAAATAAAAAGAAAGGGGAGGAGACAAAAGAATTTGTAATTCCTTTTGGAAGATCGCTCACTGTGCAGAAAGAAAGTGAAGTTAAGAAAGGACAAGCCTTGTGCGAAGGGCCAATTGATATCAAAGAGCTTTTTGGGCTCTCGGGCACGTCTGTGGCGCAAAATTATATAATAAGCGAAGTTGGCAAAATTTATTCTTTGCAAGGTGCGTCCATAAACGACAAGCACGTTGAGGTGATTGTTTCGCAGATGTTCTCCCGAATTAGGGTTAAGGATTCCGGGGATACGAAATTCGCGATCGGAGATGTTATCGAGAAAACCGAATTGATCGAGGAGAATGAAAAAGTCTCTGTGAAAAATGGGAAAGTCGCCGAAGGAGCGGGGATAGTCTTGGGGATTACAAAAACCGCGCTTTCAACTTCGAGTTTTTTGGCCGCCGCTTCCTTCCAGGAAACGACTCGCGTCCTAATATCTGCATCACTCGAAGGAAAAGAAGATAAACTTCACGGACTTAAGGAAAACGTCATCATTGGACGCTTAATTCCGGCCGGAACAGGGTACCGAAAAGATTACGAATCTAAAGATGAAGAAGAGATAGAGGAAGAATATCACCGCGAAAGAAGGGAATCTCGAACACGCTCAAGATATTAA
PROTEIN sequence
Length: 1223
METKVTDFKSISIRLASPEKILAWSRGEVTKPETINYRTQRAEKDGLFDERIFGPEKDYECYCGKYRRIRYKGIICDKCGVEVTRSIVRRERMGHIRLASPVSHIWFMRGVPSRVGLVLNLSIPELERVIYFAGYIITKVNDKAKEESHRELEKEFKSKAKKEGMKEKDKSSLKEAWDAAKKEIDSVRIRRVLSEVEYHRLSLRWGEVFEAGIGAEALFKLCKDVNMSSLRKELEKELEETENPLARKKVIKRLSLVKAMERSGTRPEWMFLNIIPVSPPALRPMVQLEGGRHATSDVNDLYRRVINRNNRLKKLLELKAPEVIVRNEKRMLQEAVDALLDNSIRRGPGAATSQAQKRPLRSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLHQCGLPKHMALELFRPFVINKLITAGLAHNIRSANRLIDDVTSDVWAILEDVIRGKYVLLNRAPTLHRLGIQAFQPILIEGNAIQIHPMVCSAFNADFDGDQMAVHVPLTEEAQREAADIMAATKNLLKPGTADPTVTPSQDMVIGCYWLTKLRSDVKGEGKIFSNPNEAVLAYDYEILDLKAKIKVRATMTPKYKKYEGGIFETSVGRLLFNSVLPNDFEYMNEDIKKKILERIVAKLIVDYGVDKVPPILDKIKSFGFKYATVSGISWGMDDLKVPEQKSAILKEAQIEAKKVDEQYNDGLLTDEERYDKVISIWAEVKRKVDEIVPTVLNEEGPIHLMVSSAARGTWTQVTQMTGMKGLVRNPAGRTIELPILSSYKEGLNVLEYFISTHGARKGTADTALKTAHAGYLTRRLVDVAQELIIREEDCKDTTGLKIIRKNIEEYGKSFNARIFGRVLAQDAKWADQKLIFKKGHLISHEDADLLDKSGIEIVTLRSPISCQTLRGLCQTCYGYDLGSNATVKMGEAVGIVAAQAIGEPGTQLTMRTFHVGGVAGASDITMGLPRIEEIFELRLPKNAAVLSDVDGTVIEIGDSGREKVVKILVSEKNKKKGEETKEFVIPFGRSLTVQKESEVKKGQALCEGPIDIKELFGLSGTSVAQNYIISEVGKIYSLQGASINDKHVEVIVSQMFSRIRVKDSGDTKFAIGDVIEKTELIEENEKVSVKNGKVAEGAGIVLGITKTALSTSSFLAAASFQETTRVLISASLEGKEDKLHGLKENVIIGRLIPAGTGYRKDYESKDEEEIEEEYHRERRESRTRSRY*