ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_1686_12

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_140

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 9 / 38
Location: 7883..9121

Top 3 Functional Annotations

Value Algorithm Source
Prolyl-tRNA synthetase {ECO:0000313|EMBL:KKT63295.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 412.0
  • Bit_score: 821
  • Evalue 5.80e-235
Proline--tRNA ligase id=3423041 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 406.0
  • Bit_score: 443
  • Evalue 3.10e-121
Prolyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 418.0
  • Bit_score: 349
  • Evalue 1.30e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGCGACTTTCGGAATTATTCGCAAAAACAGAGAGGCGGCCTCCTAAAAACGAAGAGTCAAAAAACGCCAAACTTTTGGAGCAGGCAGGTTTTATTCAGAAGCTCTCCGCTGGAGTTTATACTTTTTTGCCGTTGGGCCTTCGGGTTTTAAATAAGATAGAAAATATTGTGCGGGGGGAAATGAATAAAGCCGGCGGGGTTGAAATTTTAATGCCGTCTCTGCATCCCAAAGAAAATTGGGAGATTACCGGCAGATGGCAGGCCTTTGACGCGCTTTTTAAAACCAAAAGTAATTTCGGCGGAGAATACGCACTAGGGCCCACGCACGAAGAGGTGCTTTATTCTTTACTTAAAAAACACATCAGCTCTTATCGCGACCTTCCCGTTTATATTTATCAAATCCAAACAAAATTCAGAGATGAAAAAAGGCCCAAGGCCGGGCTTTTGCGCGCGCGGGAATTTCGTATGAAAGACCTTTACAGTTTTCACGCGAACGATGAAGACCGTGATAAATATTACGAGGTGATGAAAAAATCTTATGTAGAAATTTTTAAAAAATTGGGTTTAGCGGCCATTCCCACCACTGCTTCCGGCGGAACTTTTTCGGAGCTTTCTCTGGAATTTCAAGTTGCCTCCGATGCCGGCGAAGACACTATTTATTTTTGCAAGAAATGTAATTTAGCAATTAATAAAGAGATTGTCGGTTTAAACTCGCCGAAATGCTCAAATTGCGCGGGGCCGACTAAAGAAATAAAAGCCATAGAAGCCGGAAATATTTTCCCGCTGAAAGAAAAATACGCCAATGATTTTAATCTGAATTTTAAAGGCGAAGCAGGAAAGGAAAAATTGGTTTCAGCCGGATGCTACGGCTTTGGAACGTCACGGGTGATGGGAATTATTGCCGAAGTTATGAGCGACGAAAAAGGGCTTATTTGGCCGAATGAGGTCGCGCCTTTCACTCTCCATTTAATAGCTGTAGGCGAGTCGCCTAAAGTAAAAAAAGCCGGCGAAAAACTTTACGCCGATCTTATTGCAAGAGGCGGGGAAGCATTGTACGATGATCGCGCGGAAAGAACCGCCGGAGAAAAATTTGCCGAAGCCGACCTTTTGGGAATTCCATTAAGAGCTGTTGTGAGCGAGAAAACTTTGGAAAAAGACAGCGTGGAACTGAAAGAAAGAAATTCCGAAACGATTCGGCTGGAAGTTATAAAAACATTTTTAGAAAAATATGATAAATAA
PROTEIN sequence
Length: 413
MRLSELFAKTERRPPKNEESKNAKLLEQAGFIQKLSAGVYTFLPLGLRVLNKIENIVRGEMNKAGGVEILMPSLHPKENWEITGRWQAFDALFKTKSNFGGEYALGPTHEEVLYSLLKKHISSYRDLPVYIYQIQTKFRDEKRPKAGLLRAREFRMKDLYSFHANDEDRDKYYEVMKKSYVEIFKKLGLAAIPTTASGGTFSELSLEFQVASDAGEDTIYFCKKCNLAINKEIVGLNSPKCSNCAGPTKEIKAIEAGNIFPLKEKYANDFNLNFKGEAGKEKLVSAGCYGFGTSRVMGIIAEVMSDEKGLIWPNEVAPFTLHLIAVGESPKVKKAGEKLYADLIARGGEALYDDRAERTAGEKFAEADLLGIPLRAVVSEKTLEKDSVELKERNSETIRLEVIKTFLEKYDK*