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RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_10550_2

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_140

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 9 / 38
Location: comp(343..1200)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerD {ECO:0000313|EMBL:KKT20621.1}; TaxID=1618656 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWC2_43_8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 554
  • Evalue 9.10e-155
recombinase; K04763 integrase/recombinase XerD id=5803170 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 303.0
  • Bit_score: 369
  • Evalue 3.90e-99
putative Tyrosine recombinase xerD similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 303.0
  • Bit_score: 274
  • Evalue 2.80e-71

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Taxonomy

GWC2_OD1_43_8 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGGAAAACGTCGCAAAATTAAAGAAAGAATTTTTGGAGTATCTGGAGATAGAAAAAGGGCGAGCGGTGAAAACTGTGGAAAATTACGACAGATATTTAAAACGATTTTTTGCCTTTTCAAAAATAAGCGCCCCAAAGGATATTTCGGAGGAGATTGTCAGAAAGTATAGGATTTATCTTAATCGCGCGAACTTGGACAAAAATACGCAGAATTATTATATTATCGCTCTGCGGATGTTTTTGAAATATTTGTCCAAAAGAAATATTGATTCGCTGGACGCCGAAAAAATTGAATTGGCTAAGGCGGCGCCCAGAGAGCTAGACCTTTTAGATATTGCGGATTTGGAAAGATTACTGAACGCGCCCAAAGGAACTTCCGCGAAAATTTTGAGGGATAAGGCGATTTTAGAGCTATTTTTTTCAACCGGACTCCGCATTTCGGAGCTTTGCAATTTAAAAATTGATGATGTTAATTTAAAACGCGACGAATTTTCCGTCCGCGGAAAGGGCGGAAAAATCCGAGTGGTGTTTTTGTCCAATAGGGCTAAAGACGCCATTAAAAAATATTTGGAAAAAAGGGGAGAAATTGATAATGACAAATTATTTTCTGTAACCCCGCGCTCTATTCAAAGGATGATAAAAAAATACGCGATTGTCGCCGGAATTTCAAAAAAAGTTACCCCGCATGTTTTGCGCCACTCTTTCGCCACGGATTTATTGCAAAATGGCGCGGATTTACGCTCGGTGCAGGCAATGCTCGGCCACGCCAACATTTCAACCACTCAAATTTATACCCACTTTACCGATAAACAATTAAAAGAAGTCCACAAAGCGTTTCATGGGAGAAGAAGAAAATAA
PROTEIN sequence
Length: 286
MENVAKLKKEFLEYLEIEKGRAVKTVENYDRYLKRFFAFSKISAPKDISEEIVRKYRIYLNRANLDKNTQNYYIIALRMFLKYLSKRNIDSLDAEKIELAKAAPRELDLLDIADLERLLNAPKGTSAKILRDKAILELFFSTGLRISELCNLKIDDVNLKRDEFSVRGKGGKIRVVFLSNRAKDAIKKYLEKRGEIDNDKLFSVTPRSIQRMIKKYAIVAGISKKVTPHVLRHSFATDLLQNGADLRSVQAMLGHANISTTQIYTHFTDKQLKEVHKAFHGRRRK*