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RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_5789_18

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_140

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 9 / 38
Location: 12382..13101

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 {ECO:0000313|EMBL:KKS95177.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 215.0
  • Bit_score: 415
  • Evalue 4.30e-113
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=15189720 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 211.0
  • Bit_score: 191
  • Evalue 1.20e-45
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 215.0
  • Bit_score: 153
  • Evalue 6.10e-35

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Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGGATGTGATTACCGCCCAAAAGCGGGATCTATATGGTAAAAAAGTGAGGAACCTGCGCAAGCAGGGCTTTTTGCCTGCCGTGGTTTACGGCGGAGGAAAGAGCGCTGAGCCCATTACTGTGAAAGAGTCCGAGTTTCTTAAACTTTGGAAATCAGCTGGCGAATCAACCGTAGTAGAGTTGGATATTGGCGAAGAAAAAAAGAATGTTTTAATACACGACGTTGATATTGACCCAATAAAAGACAATCCCATCCACGTTGATTTTTACGCGGTGGATATGACTAAAAAAATTCATGTGGATGTGGCGTTGGAATTTATCGGCGAATCCGATGCGGTTAAAGCCGGTGGAATTTTGGTGAAAGTTCTGCACGCGTTAAAAGTGGAAGCTTTGCCTAATGATTTGCCGCACTCAATTTCAATAGATATTTCGCAATTAAAAGTCGCGGGGGATTCTATTACGGTTAAAGGCGTAAAAATACCGAAAGGAGCCAAAGTTTTGGATAATCCCGAGGAAACCGTAGTGATGGTTGAAGCGCTCCGCGCCGAGGAGGAAGTAAAGGCGGAGGAAGCCGCCGAAGCGCCATCTCTGGAATCCATTGAAGTGGTTGGCAAGAAATCCAAAGCGGAAGCGGAAGAGGGAACCGAGGACAAAAAACCTATCTCGCCGGCCCGCCTGCCAATTGGCGGGCAGGCAGGCAAGTCTTCAAAAAATGAGTAA
PROTEIN sequence
Length: 240
MDVITAQKRDLYGKKVRNLRKQGFLPAVVYGGGKSAEPITVKESEFLKLWKSAGESTVVELDIGEEKKNVLIHDVDIDPIKDNPIHVDFYAVDMTKKIHVDVALEFIGESDAVKAGGILVKVLHALKVEALPNDLPHSISIDISQLKVAGDSITVKGVKIPKGAKVLDNPEETVVMVEALRAEEEVKAEEAAEAPSLESIEVVGKKSKAEAEEGTEDKKPISPARLPIGGQAGKSSKNE*