ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_20211_4

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_48_180

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(3743..4264)

Top 3 Functional Annotations

Value Algorithm Source
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 173.0
  • Bit_score: 352
  • Evalue 4.20e-94
2'-5' RNA ligase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJ40_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 25.1
  • Coverage: 187.0
  • Bit_score: 69
  • Evalue 3.00e-09
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 168.0
  • Bit_score: 65
  • Evalue 2.10e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_SM2F11_48_13 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 522
ATGACTTCTCGATGTTTTGTAAGCATAGATTTGCCGCCGCAGATAAAAGATTATCTGGGCCGTTTAGCGCGCCCTGACATCTATTGGATCCGCTGGATGAATCCGAAAAATTTTCATATCACTTTGAGCTTCCTCGGTGAACTAAATAACGCTCGCATCACGGAATCACAAAAAGCGCTATCTGAGGTGGCGCCGTATTTCAAACCATTCTCGTTGAAACTCGCCGCGATCGAAACTCATCAGGATATGCTTTGGCTTGTGCCAGAGGATAATGACGTCCTCAATGAGCTTCGAGATGAGCTCAAAGATAAATTGAAAAGCGCAAGGCTTGGTAAAAGAGAACGCAGAAGCTTTCTACCGCACATTCTTTTGGCCAAATCCAAAACCGGCCGCAACATGCGTCCAGTCATAGACAACTTTGAACCGCGCGAGTTCACCGTGGACAAGATTGATTTATATGAGAGTGAGCTAACACCTGGTACGGCAACACATCGGCTGATCGAGAGTTACAAACTCGGATAA
PROTEIN sequence
Length: 174
MTSRCFVSIDLPPQIKDYLGRLARPDIYWIRWMNPKNFHITLSFLGELNNARITESQKALSEVAPYFKPFSLKLAAIETHQDMLWLVPEDNDVLNELRDELKDKLKSARLGKRERRSFLPHILLAKSKTGRNMRPVIDNFEPREFTVDKIDLYESELTPGTATHRLIESYKLG*