ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_29353_1

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_48_180

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(493..936)

Top 3 Functional Annotations

Value Algorithm Source
homing endonuclease LAGLIDADG/HNH Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 147.0
  • Bit_score: 304
  • Evalue 6.50e-80
Homing endonuclease LAGLIDADG/HNH id=2722905 bin=GWC1_OD1_38_17 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 131.0
  • Bit_score: 163
  • Evalue 1.30e-37
homing endonuclease LAGLIDADG/HNH similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 142.0
  • Bit_score: 146
  • Evalue 6.00e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_SM2F11_48_13 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 444
ATGAGCGATTCATGGCTAAAAGCCATATCTCCGGAAATTGGTCATTATCTGGCCGGTTTCGCGGATGGTGAAGGAAGCTTCAACGTTTCTCTTCGCAAAAGACCAGACCATAAAATGGGCTGGCAAGTAGTTCCCTGCTTCAATGTCTCACAAAGAGACCCGACAATCCTGGCTTTGTTCAAAAAGCATTTGGGTTGCGGCCGATTTGTGACTCGCAGGGATGGAGTGCACTATTATGTAGTGCAAAATCCAACTGCTATACAAGAAAGGGTTATTCCTTTCTTCCAGAGGTTTAAGTTTCTATCCTCGAAAATGAAAAGAAACTTCATGCTGTTTCAGCAAATCGTAGAGTTGATGAATGGTAAAGGCCATCTAAATTCTAACGGCTTGCTGGAAATAATCCAGATCCGAGAGCAATTAAATCTTGGAAAAGGCAGAAAATGA
PROTEIN sequence
Length: 148
MSDSWLKAISPEIGHYLAGFADGEGSFNVSLRKRPDHKMGWQVVPCFNVSQRDPTILALFKKHLGCGRFVTRRDGVHYYVVQNPTAIQERVIPFFQRFKFLSSKMKRNFMLFQQIVELMNGKGHLNSNGLLEIIQIREQLNLGKGRK*