ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_10

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_50_67

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 6623..7552

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 309.0
  • Bit_score: 594
  • Evalue 1.10e-166
DNA-directed RNA polymerase, alpha subunit; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=96114 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 319.0
  • Bit_score: 305
  • Evalue 7.50e-80
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 308.0
  • Bit_score: 266
  • Evalue 8.30e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_SM2F11_48_16 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 930
ATGGAAAATATCCAGCTCCCCAAAAAAGTCTCGTTTGAAGATTTAGGCGATCATAAATACCGGGTCGTCATGGAACCGCTCTATCCCGGCTATGGCGTGACTTTGGGCAATTCGCTCCGCCGCGTTTTGCTGTCGTCTCTGCCTGGTGCTGCCGTGGTTGCGGTCAAGATCAAGGGCGTGGATCATGAATTTTCCACCGTGCCGAACGTCAAGGAAGACGTGATTGAAATTATTTTGAATCTAAAGCAGGTGCGCCTCAAACTTCATTCCGACCAGCCGGTCAGACTGGAACTGAAGGTCAAGGGCGAAAAAGCCGTGACCGCCGGTGATTTTAAGAAAAACTCGGACGTGGAAATTATCAATTCGGATATGCATCTGGCCACCCTGGACGGCAAGTCCGCCGAACTGGAAATGGAAGTGGTCGTGCAAAAGGGCCGCGGTTATGTGCCGGTGGAACAGCGCGAAAACGAGAAACTGGAAATTGGCATGATTGCCGTGGACGCGATTTACAGCCCAGTCAGGCGCGTCAATTATGAAATCAATAATGTCCGTGTCGGCCAGATTACCAATTACGACGAACTGATTCTGGATTTGGAAACCGACGGCACCGTTTCCGGAGAAGATGCGATTGACCAAGCCTCTTCGATTCTAATGCAGCACTTCGCCCTGTTGGCCAAGGAAACTCTGACCGCCAAGGAAGAAGTGCCGGTTTTGGACGTCGCGCACGAAGAAGGCATTAAGACTTCCGAAGAGGATGATTTGAAGTCTTTGGGATTGTCCAACCGTTCTTACAACGCGCTGCTTAAAAACGACATCAGCCGGGTTTCCCAACTCAAGGGCATGGATCGGGAACAGCTCACCGCACTCGAAGGCCTGGGTGAGAAATCGATTGAAGAGATTGAAAAAGCCATTAGCGAAATGCAGAAATAA
PROTEIN sequence
Length: 310
MENIQLPKKVSFEDLGDHKYRVVMEPLYPGYGVTLGNSLRRVLLSSLPGAAVVAVKIKGVDHEFSTVPNVKEDVIEIILNLKQVRLKLHSDQPVRLELKVKGEKAVTAGDFKKNSDVEIINSDMHLATLDGKSAELEMEVVVQKGRGYVPVEQRENEKLEIGMIAVDAIYSPVRRVNYEINNVRVGQITNYDELILDLETDGTVSGEDAIDQASSILMQHFALLAKETLTAKEEVPVLDVAHEEGIKTSEEDDLKSLGLSNRSYNALLKNDISRVSQLKGMDREQLTALEGLGEKSIEEIEKAISEMQK*