ggKbase home page

RIFCSPHIGHO2_01_FULL_OP11_39_95_rifcsphigho2_01_scaffold_920_22

Organism: Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_39_95

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(16449..17528)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=uncultured bacterium RepID=K2EU30_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 359.0
  • Bit_score: 611
  • Evalue 4.30e-172
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 359.0
  • Bit_score: 659
  • Evalue 1.90e-186
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 358.0
  • Bit_score: 439
  • Evalue 1.10e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OP11_Woesebacteria_38_26b → Woesebacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1080
ATGAAAAGAAAAGACGTTGTGGGTTTAATAAAAAGAGGAAGAGAGCAGGGATTCCTGACTCAGGATGATATTTTAGTTGTATTTCCCGACGCCGAAGATAGGTTAGAAGAGTTAGACGAGCTTTACGATAAGTTGCTGGCCGAGGGAATCGACGTATTTGAATCGGTGGAAACAGAGGAAATCGATTCGGACGAAAAGGCCAAAGAAAAACTCGAGCGGGAGATTGAAATATTATCCAAGCTTGGGGGGGCGGAGTCAACTGATCCGGTCAGGCAATATTTACGGGAGATTGGTAAAGTACCGCTTCTGGTTGCTGAAGAAGAGGTTGAACTTGCCAAGCGCTATGAAAAAGCTGAAAAAGCAGCCAAGGATAAATTAACGGAGTCCAATCTTAGGTTGGTTGTCTCAATCGCTAAAAAGTATATCGGTCGTGGACTATCTCTTCTTGATCTTATCCAAGAGGGTAATCAGGGATTAATTAGAGCGGTTGAGAAATACGACTGGCGTAAGGGTTATAAGTTTTCGACCTATGCAACCTGGTGGATACGCCAAGCCATAACCAGAGCCATTGCCGATCAGGCAAGGACAATTCGGATTCCTGTCCACATGGTTGAAACTATTAATAAGTTGTATAGAATCAGCCGCCGTCTTATGCAGGAGTTGGGTCGTGAACCAACTGCGGAGGAGATTGCCGAAGAGGCGGAAATTGATGCGGACAGGGTCCGCGAGATATTTAAAATTGCCCAGGAGGTAACTAGCCTTGAGGCTCCGGTCGGAGAGGATCAGGAAAGTTTTCTGGGAGATTTTATTCCCGATGAGAGCCAGCTTTCTCCCGTTGACGCAGCTTCGAAACAACTCCTCAAGGATCATTTAGACGAGGTACTTTCTACTCTCTCTGATCGGGAGGCGAGGGTTCTAAAGCTTCGATTCGGATTGGAGGGAAATAAACAAATGACCCTGGAAGAAGTCGGAAAGGTATTCGGAGTAACCCGCGAAAGGATTCGTCAAATAGAAGCAAAGGCTTTAAGAAAACTGAAACACCCTAGCAGAAGAAAGAAGTTGCAGGACTACCTTGAGTGA
PROTEIN sequence
Length: 360
MKRKDVVGLIKRGREQGFLTQDDILVVFPDAEDRLEELDELYDKLLAEGIDVFESVETEEIDSDEKAKEKLEREIEILSKLGGAESTDPVRQYLREIGKVPLLVAEEEVELAKRYEKAEKAAKDKLTESNLRLVVSIAKKYIGRGLSLLDLIQEGNQGLIRAVEKYDWRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLYRISRRLMQELGREPTAEEIAEEAEIDADRVREIFKIAQEVTSLEAPVGEDQESFLGDFIPDESQLSPVDAASKQLLKDHLDEVLSTLSDREARVLKLRFGLEGNKQMTLEEVGKVFGVTRERIRQIEAKALRKLKHPSRRKKLQDYLE*