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RIFCSPHIGHO2_01_FULL_OP11_49_18_rifcsphigho2_01_scaffold_10303_8

Organism: Candidatus Chisholmbacteria bacterium RIFCSPHIGHO2_01_FULL_49_18

partial RP 42 / 55 MC: 3 BSCG 40 / 51 ASCG 8 / 38
Location: comp(6176..6475)

Top 3 Functional Annotations

Value Algorithm Source
rbp; RNA-binding protein Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 194
  • Evalue 8.30e-47
Glycine-rich RNA-binding protein GRP1A id=3012495 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 101.0
  • Bit_score: 116
  • Evalue 1.60e-23
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 102.0
  • Bit_score: 102
  • Evalue 8.70e-20

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Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCTACCAAACTATATGTTGGAAATCTTGATTATGGCACGACCAGCGATCAACTCGGCCAACATTTCGCGCAAGCAGGAAAGGTTGTTGAGGTCAATGTTATCAGCGACCGATACACCGGCCGATCAAAAGGCTTTGCTTTCGTTGAAATGGCAAGCGAGAAGGAAGCTGCGAAGGCTATCGAGATGTTCAACGAAAAAGATTTCGGCGGAAGGTCAATCGTCGTGAACGAAGCCCGACCCAAGCGCGAGCCGAGTTTCGGCGGAGGCGCAGGCGGAGGCGGCGGACGCGGACGATAA
PROTEIN sequence
Length: 100
MATKLYVGNLDYGTTSDQLGQHFAQAGKVVEVNVISDRYTGRSKGFAFVEMASEKEAAKAIEMFNEKDFGGRSIVVNEARPKREPSFGGGAGGGGGRGR*