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rifcsphigho2_02_scaffold_2_71

Organism: RIFCSPHIGHO2_02_FULL_Fluviicola_43_260

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 12 / 38
Location: 87732..88253

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9A9_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 172.0
  • Bit_score: 275
  • Evalue 3.60e-71
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 173.0
  • Bit_score: 351
  • Evalue 7.10e-94
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 172.0
  • Bit_score: 275
  • Evalue 1.00e-71

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Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 522
ATGGAAGCCGACATCAAACATATCATTGATGGTTGTGTGAATTGGGAAAGACGGTCGCAGGAACAGCTGTATCGCCGCTTTTCAAAGGATCTTTTCAAAGTGTGTAAGCTTTACGGGGCCGACACACAAGACGCCGAAGATATGTTACATGATGCGTTTATGCACATTTACAAAAATATCGGATCTTATCATTTTTCGGGCGTATTTGAAGGATGGTTGCGAAGAGTGACCGTAAATTGCTGCTTGCAGGCGCTCCGAAAACGTAAAACTTTCCAGCAGCTTGCTGAAATTGCTGTAATTGATGAGGTGGAAGATGATAACGACAAACCGATTCCGTTTGTAGCTATTTTGGAGGAGATCAATCGCTTGCCTGCCAAAGCAGGATTGGTGTTGAAATTATATGCACTTGAAGGCTGGTCACACGCCGAGATCGCCGAAGAACTTGAAATTACTGTTGGAACTTCAAAATCCCAGCTCAATTACGCACGTTCCGTATTGAAACAAAAACTGATGGCTTCATGA
PROTEIN sequence
Length: 174
MEADIKHIIDGCVNWERRSQEQLYRRFSKDLFKVCKLYGADTQDAEDMLHDAFMHIYKNIGSYHFSGVFEGWLRRVTVNCCLQALRKRKTFQQLAEIAVIDEVEDDNDKPIPFVAILEEINRLPAKAGLVLKLYALEGWSHAEIAEELEITVGTSKSQLNYARSVLKQKLMAS*