ggKbase home page
This organism can only be binned in the context of its binning project RIFOXYC1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

rifcsphigho2_02_scaffold_6243_12

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_35_18

near complete RP 40 / 55 MC: 6 BSCG 15 / 51 ASCG 33 / 38 MC: 4
Location: 7565..8521

Top 3 Functional Annotations

Value Algorithm Source
ASCG--Pre-mRNA--processing--ribonucleoprotein similarity ASCG
  • Identity: null
  • Coverage: null
  • Bit_score: null
hypothetical protein; K14564 nucleolar protein 56 id=5048459 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 316.0
  • Bit_score: 263
  • Evalue 3.30e-67
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 334.0
  • Bit_score: 212
  • Evalue 2.50e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_OD1_40_9 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGGCTAAATTCATCTTTTCAAATGTAATAGGAAGCTTTGTTTTCAGCGAGAATTATAAGCTTGTTGATGAATTGCTGTTTAAGGATACTGAGCAGTATAGGGAAAAAGCAATATATGAAGAAAAATTAATCAAGAAGCATGGCAGTTTAGCAGCGCCAGAGGACAAGGATTTGTATAATATTCTGCTGTTCTTTAAAGACAAAAAGTATTTTTCCCAGTTCTATAAAAATAATCTTGAAATTACCAAGGATTCTGTAAGGAAATCTGTAAATAATGATGCTTTGATAATACAGGCAGTAAATGCTATTGATGCGGTTGATAAAACAATTAACCTGCTTGCAAAAAGATTGAGGGAATGGCATTATTTATATAATCCTGAAATTTCAAACAGCATAGAAGACCATGAAAAGTTTATTTCTTTAATAACAAGAACATCAAAAATTCAGTTATTGAAAGACCTGAATATTGGTGAGAAAGATGCTATGGGCGCTGCCCTGAAGGAGAAGGATGTTTCTGCAATACTATTATTAGCAACACAAATCAATAACCTTTACAAGCTAAAAGCGCATTATGAAAATTACCTGAACCAGCTTGAAAAAGATGTATGCCCTAATTTTATGGAAATAGCTGGCATAACAATAGCTGCAAAATTAATAAGCCATGCCGGAAGCATGAAAAGATTAGTGGAGATGCCTGCATCTACAATACAGGTTTTAGGCGCGGAAAAGGCTTTGTTCAGGCATATGAGGAACAAAAGAAGAAATTTGCCTCCAAAGCATGGCATTATACATGAGCACCAACTAATTCAAAAATCAAACAGTAAAATGCACGGCAAGGCTGCGAGGGCTTTAGCCGATAAATTGAGCATTGCTGTCAAGATTGATTATTTTAAAGGAAAATTTATTGGCGATAAGCTGAAGAAAGAGCTGGTTGATAAGTTTAAGATCCAGTATTAG
PROTEIN sequence
Length: 319
MAKFIFSNVIGSFVFSENYKLVDELLFKDTEQYREKAIYEEKLIKKHGSLAAPEDKDLYNILLFFKDKKYFSQFYKNNLEITKDSVRKSVNNDALIIQAVNAIDAVDKTINLLAKRLREWHYLYNPEISNSIEDHEKFISLITRTSKIQLLKDLNIGEKDAMGAALKEKDVSAILLLATQINNLYKLKAHYENYLNQLEKDVCPNFMEIAGITIAAKLISHAGSMKRLVEMPASTIQVLGAEKALFRHMRNKRRNLPPKHGIIHEHQLIQKSNSKMHGKAARALADKLSIAVKIDYFKGKFIGDKLKKELVDKFKIQY*