ggKbase home page
This organism can only be binned in the context of its binning project M09. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

rifcsphigho2_02_scaffold_3326_11

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_40_54

near complete RP 37 / 55 MC: 7 BSCG 17 / 51 ASCG 33 / 38 MC: 3
Location: comp(9241..9996)

Top 3 Functional Annotations

Value Algorithm Source
triosephosphate isomerase (EC:5.3.1.1) similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 246.0
  • Bit_score: 276
  • Evalue 6.50e-72
Triosephosphate isomerase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S313_DESTD similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 246.0
  • Bit_score: 276
  • Evalue 2.30e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfurobacterium thermolithotrophum → Desulfurobacterium → Desulfurobacteriales → Aquificae → Aquificae → Bacteria

Sequences

DNA sequence
Length: 756
ATGCAAAAACTCATAGCAGCAACCTGGAAGATGAACAAAACCATAGAAGATGCAATAAACTTCATCAAAGATTTTAAAAAATTGGCTGTAAATGTAAAAAACGCAGAAATCGTCATTTGCCCTTCTTTTACATCATTGCAGGCAGTTTCCAAAGAGCTGAAAAATACCAATATAAGATTAGGCGCGCAGAACATGCATCCTGAAGATTCAGGGGCTTTCACGGGCGAAATCTCGCCATTGATGCTTAAAGACTTGGGCTGTGAGTACGTCATCTTAGGGCATTCGGAAAGAAGGGAAATGGGAGAAAATGACAAGTTTATCAACAAAAAAGTTATTGCAGCATTTAAGCATGACATTAACCCCATTTTGTGCGTTGGTGAAACCCTCGAGCAGAGGCAGAAAGGGGAAACAGAAGACGTTCTTGAAGACCAGCTTATTAGCTGCTTAAAAGGCGTAAGCAATTCAAAGGGGCTTGTTGTTGCCTACGAGCCCGTATGGGCAATCAGCAGGGGCAACCCAAACGCAAAAGCAGCGACAAAGGCTGATGCAGAGGAGTGCCATCTTTTCATAAGGAAGCTTCTTGCAGGAATTTTTGATGAGGAAACTGCAAAAGAGACAAGAATTATTTACGGCGGCTCAATGAAGCCTGAAAATGCAAAAGAGCTTCTTTCAATGCCCAATATTGAAGGAGGCTTGGTTGGGAACGCCTCTCTGGACGCAAAAAGCTTTGCCGAGATTGTTGAAGCTGTGAGATAG
PROTEIN sequence
Length: 252
MQKLIAATWKMNKTIEDAINFIKDFKKLAVNVKNAEIVICPSFTSLQAVSKELKNTNIRLGAQNMHPEDSGAFTGEISPLMLKDLGCEYVILGHSERREMGENDKFINKKVIAAFKHDINPILCVGETLEQRQKGETEDVLEDQLISCLKGVSNSKGLVVAYEPVWAISRGNPNAKAATKADAEECHLFIRKLLAGIFDEETAKETRIIYGGSMKPENAKELLSMPNIEGGLVGNASLDAKSFAEIVEAVR*