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rifcsphigho2_02_scaffold_36874_7

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_40_54

near complete RP 37 / 55 MC: 7 BSCG 17 / 51 ASCG 33 / 38 MC: 3
Location: comp(3492..3677)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor Spt4 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 61.0
  • Bit_score: 104
  • Evalue 3.90e-20
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-5 similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 61.0
  • Bit_score: 104
  • Evalue 5.40e-20
DNA-directed RNA polymerase, subunit E similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 59.0
  • Bit_score: 74
  • Evalue 1.60e-11

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Taxonomy

Thermoplasmatales archaeon SCGC AB-539-C06 → Thermoplasmatales → Thermoplasmata → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 186
ATGAAAAAAAAAGTCTGCAAAAGATGCAAAATGCTTGTTGAGGGCAGCGAGTGCCCTGTCTGCAAGACAAACCAGTTTTCAACAAACTGGCAGGGGCGCCTGTACATAATTGACCCCAACAAGTCAATAATAGCCGAGAAAATAGGGCTTAAAGCCAAAGGCGAATATGCAATCAAGGTAAGGTAA
PROTEIN sequence
Length: 62
MKKKVCKRCKMLVEGSECPVCKTNQFSTNWQGRLYIIDPNKSIIAEKIGLKAKGEYAIKVR*