ggKbase home page

rifcsphigho2_02_scaffold_11123_7

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_37_9

near complete RP 35 / 55 MC: 3 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 1
Location: comp(6838..7587)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA assembly protein {ECO:0000313|EMBL:KHO50505.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 178.0
  • Bit_score: 239
  • Evalue 5.70e-60
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 177.0
  • Bit_score: 219
  • Evalue 3.30e-54
KH domain protein similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 174.0
  • Bit_score: 191
  • Evalue 2.70e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR11 → Archaea

Sequences

DNA sequence
Length: 750
ATGCCACGACAAAAGAAAATTAAAACACCAAAAGAAGAAATATCTGAAAGTGTTGACGAATCTGCAGTTTCAGAAAAAACAGATGAATTAGACAAAGCTATAGATGATTCTCTTCTTTTGCATAAGGCAGATGGATATGATACGTTAGAAGAAAAAGATGATGACCTAAATTTGGATGATTCTCCTATCCAAACACATGGACAGGAATTTACTTATGAGATAAAGATTCCAAAAGACAGGATTGCAGTCCTGATAGGAAAATCTGGAGAGACAAAAAAGAAAATAGAATCAGAAACACACATAAAGCTTAACATCAACTCAAAAGATGGTGATGTAAGCATCTCAGGAGAGGATGCTCTTGGTCTTTACACCGCAAGAGAAGTTGTAAGGGCAATAAGCCGAGGCTTTAATCCAGAATATGCTCTTCAGCTGCTAAAATCTGATTATTCCTTTGAAGTCTTCAATATCATAGATTATGTCGGCAAAAATAAAAATGCAATCCTTAGATTGAAAGGAAGGATCATAGGTAAAGAAGGAAAAGCACGAAGGATAATTGAAGAACTGACTGAAGCAAACTTATGCGTTTACGGCAAGACAATAGGCATAATAGGCGAGATAGAAAATGTCAGCATCGCAAGAAGAGCTGTTCAATCATTGTTGAGCGGAGCTCCACATGCTAATGTATATAAATGGCTCGAGCACAGAAGAAAAGAGCTCAAGATGAAGAATATGCTTGAAAGAGAAATTTAA
PROTEIN sequence
Length: 250
MPRQKKIKTPKEEISESVDESAVSEKTDELDKAIDDSLLLHKADGYDTLEEKDDDLNLDDSPIQTHGQEFTYEIKIPKDRIAVLIGKSGETKKKIESETHIKLNINSKDGDVSISGEDALGLYTAREVVRAISRGFNPEYALQLLKSDYSFEVFNIIDYVGKNKNAILRLKGRIIGKEGKARRIIEELTEANLCVYGKTIGIIGEIENVSIARRAVQSLLSGAPHANVYKWLEHRRKELKMKNMLEREI*